| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4296 |
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| Symbol | |
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| ID | 1171901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4474439 |
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| End bp | 4475644 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637346022 |
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| Product | NupC family protein |
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| Protein accession | NP_719821 |
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| Protein GI | 24375778 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGT CCATCCTTGG TATTTTTGTA CTCTTAGGCG TTGGTTTGCT GTTTTCTGAC
AACCGCAGTT TGATCAGCTG GCGCGCCGTT ATCGGTGCAT TTGGCATTAT CATCGCGCTC
GCTTTTTTTG TGCTGGCAAC CGAGATCGGT GCCGATGTGC TACTGGCCGT ATCGAATACC
GTAGGCAAAG TCTTTGGTTA TGGTACTGAA GGGATTAAAT TTGCCTTTGG CAGCTTAGTC
AATTTCAGTG TTGAAGGCAT TGGTTTTGTC TGGGCATTAC AGGTATTACC GCAAATTATC
TTTACTGCCG CACTCACCTC TTTGCTGTAC TACTTAGGCA TTATGCAGTG GTTTGTGTTG
ATTATTGGTG GCAGTTTGCA AAAGGTGCTC GGCACATCAC GGGCGGAGTC AATGAATGCA
GCGGGCAATA TTATTCTCGG TCAAACCGAA GCACCGTTAC TGATCAAGCC CTACCACCGC
GTCCTCACCC GCGCGCAAAT TTTTGCGGTG ATGGTCGGTG GATTGTCTTC GATTGCTGGC
TCCATTTTAG CGGGCCTTGC GGGGATGGGC GTTGCACTTA ACTATCTAAT TATGGCTTGC
TTTATGTCCG CTCCAGCGGG GTTGATGTTC GCGAAGTTGC TTATCCCAGA AACCGAGCCA
ACCGTTAACG AAGTGCCAGA ATTACCCGAT GATGAAAAGC CGAGCAGCTT TATTGATGCC
ATAGCCAAAG GTGCCATTGC TGGTATGGGA ATCGCTGCCA TCGTCGGCGC AGTCATTATT
GCCTGTATTG GCCTCATGGC CTTGTTGAAC GGCGGATTGG GTGCGATTGG TGAACTGTTT
GGTATGCCAA CCTTAACCGT AGATATGATC CTCGGCACCT TGTTTGCGCC AGTAGCTTGG
TTGATTGGTA TTCCTTGGGT CGAAGCAAGC ACAGCCGGCG CCTTCCTAGG GCAAAAAATC
GCCATGAATG AGTTTGTTGC CTTCGCCAAT ATGGGCAATG TGGAACTGTC TGCACGTAGT
AATGCCATTA TGACCATTGC CCTGTGTGGC TTTGCCAATA TCGGCTCAGT AGCCATGGTG
TGTGGCGCCC TGAGTAAAAT GATCCCGCAA CGTGCAGGGC TGATTGGCCA GCTGGGGATG
AAAGTACTGC TCGCGGCAAC GTTAGCAAAC TTAATGAATG CTGCAATTGT CAGTTTGTTT
ATCTAA
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| Protein sequence | MIQSILGIFV LLGVGLLFSD NRSLISWRAV IGAFGIIIAL AFFVLATEIG ADVLLAVSNT
VGKVFGYGTE GIKFAFGSLV NFSVEGIGFV WALQVLPQII FTAALTSLLY YLGIMQWFVL
IIGGSLQKVL GTSRAESMNA AGNIILGQTE APLLIKPYHR VLTRAQIFAV MVGGLSSIAG
SILAGLAGMG VALNYLIMAC FMSAPAGLMF AKLLIPETEP TVNEVPELPD DEKPSSFIDA
IAKGAIAGMG IAAIVGAVII ACIGLMALLN GGLGAIGELF GMPTLTVDMI LGTLFAPVAW
LIGIPWVEAS TAGAFLGQKI AMNEFVAFAN MGNVELSARS NAIMTIALCG FANIGSVAMV
CGALSKMIPQ RAGLIGQLGM KVLLAATLAN LMNAAIVSLF I
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