| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4093 |
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| Symbol | |
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| ID | 1171707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4248127 |
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| End bp | 4252299 |
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| Gene Length | 4173 bp |
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| Protein Length | 1390 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345827 |
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| Product | hypothetical protein |
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| Protein accession | NP_719623 |
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| Protein GI | 24375580 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACGC TTTTTACTGC TAAAAAACTA AGCCGTTTTT GCTGGCAACT ATTGGCGCTG
ATCTTAGTCT TGTTTGCCTT GACGGTAAGC TTGATCCGAG GACTATTGCC TCAGGTCGAT
GAGGTTCGCC AGCAGTTAGT TGAGTATGTA AAAAGCGAAT ATCAGATCAA TATTCAGGTG
GGTGAGTTAT CTGCCCAGTG GCAGGCCTTT GGCCCCGCGG TAACCATTGA TGACCTAGTG
ATCCCTCCGC AGGAAAAATT ACCCGTCACA GTGTTAGTGA AGCAAGTCCA AATCAAGTTG
GATTTTTGGC AGTCTTTGCT GACCACCAGT CCGCGCATCG AAGATGTGAA TTTTGAAGGT
GTTCATATCG CCCTCGATAT GGATAAATTG TCTGGCAGAA CAACGGGCCG AGTCTCTGGA
CAATCCACGC AAACCGATTG GTTGTATATA TTACTACTCA AGCAGCTCGA ACGATTTTCG
CTGGAGGATG CTTCGGTGCA GCTGCTGAGC TTGCACAATG AGTATCGACC CATTCATATT
CGCCACCTCA ATTGGCGTAA TAGCGGCATG CAACATCGCG GTGCAGGGGA AATTTACCTC
GATAACAATG CCATGGTAAA GGAATCCCTC AGCCTACAGC TTGATATTAC TGGTGATGCG
ACTGCGCCCG ATACGCTGAA GGGACAAATC TATTTGGCGG CTCAGTCACT CGATTTAGGC
GAATGGGCAT CGCGCCAACC TAATCCCTAT GACCCAAGCA AAAAGCTGCC CCTAGAGGGC
ATAGTGAATC TTAAGGCATG GTTTGATGTA GCCCATCGTA GTATACGTTC TGGTCTGGTG
CAGTTTGAAC CCAGTTGGTT GCAGTGGTCG ATGCAAGGAC AGCCACAAAA GTTTGAGATC
CAATCCGGTA GTATCCGTTG GGAGCCCAAG GCGACAGGAT GGGAGATCAG TAGCGCTGAT
TTAGATTTTG TCACTAATGG TGAGCATTGG CCTGAACTAA AATTAGCGGC GAAACAACAA
GATGATGCTT TATATGCCTA TGTGAGCCGT GTAGATTTAC CGACCTTGTT TCCATTGTTG
CCGCTTTTCC CCGGTGTCGA TTTAGCCGTA CTTAAGCAAT GGTTCCATCT CGCGCCCGAG
GGCAGTGTTG GGCCTATTCG CCTCTATCAA GCTGCCGATC AACCTTTGCT AGCAAGTACT
AGCGTCACGC AATTACACTG GCAGAAAGTG GAGGGGATAC CCAATACCCA GCCCTTAGAT
CTTAAGTTGC AATGGCAGGA TGAAACGCTC GTTTTTTCGC TTCCCGAGCA AACTTATACC
CTCGATTTTG GCGATGAATT TTCTGCTCCC TTAGTGCTCC AAGGCGCTGA ATTAACCGGT
GCATTTGATA CTAAGCGTGC GACGTTATCT ATGCCCCATG TTCAGCTTGC AAACGATGAC
ATTGGCCTCT CTGCCGCCCT AAAACTGGAT TTTAGCACCG CAGCCAGTAT GTCCCTTGCT
GCTAATGTTG CAGTCAAAAA TGCTGCTAAT GCAGATAAAT ACTTTCCTAT CAAAGCTATG
GGGGAGTCTT TGGCCGAGTA TCTTGATGGC GCGATAAAAG CGGGACAGAG TCAAAATGCG
CAAGTACTGT GGCAGGGTGC GTTATCGAGC TTCCCCTTTG AGGATAATAG TGGCGTGTTC
CAAGCGGCAT TTACCTTAAA CAATGCCGAA TACCAATTCC AACCTGATTG GCCTGCAGTC
ACAGATCTTT CCCTTGATGC GTTATTTGAA AATGCCCGTA TGGATATCTG GGTCAACCAA
GGCAAACTGA TGAATGTGGT GGCCGATGGT GCCCATGTGT TTATTCCTGA ACTGGGTGAG
CGTTCCCTGT TAAAAATTCA GGCAGACCTC GTCACCGACG GCAGTGCGGC GACGAAAGTG
TTACAGGCAT CTCCCCTTGC AGATACGGTG GGCGAGACCT TAAAAGTTGT GCAGGTTCAG
GGCGCGGTAG CGGGTAACTT AGACATCAGT ATCCCCTTGT ACGAGGGAGA GGCCGAGGAT
ATTCGTGGTC AAATTGTATT TGATAATACG CCAGTTTTTA TTGCCCAGCC TGGGTTACAA
CTGAAAGCCG TTACGGGCAC AGTGCAGTTT GCCAATGAAG TCGTTGAAGG ACAAGGTATT
AAGTCACGCC TATTTGAGCA GCCCTTGGAG TTTAGCTTTG CAACTAAGCC CGAAGGTAAA
GATTTCACGC TGAATTTAGA TATGAAAAGT CGTTGGGATC TCAGTCGCTT ACCTCAAGAA
CTCCATAATC CACTGAGTGG TTTTTACCAA GGTAAGGTTG CGTGGGGCGG CAATTTGAGC
ATGGTATTCG ATGAGCAAGG CTATCAAATT CAAGCCAATT TAGGCTCAGA TCTGGTCGGT
GCAACCTTAA AATTACCTGG TGTTTTTGCA AAGCCGACTG ATGAGCCTAG ACCCTTAATG
GCCGAGTTTT CCGGCGATCA GCAAGCCGCA ATCCTTAGGG TCAAACTCGA TAAACAGGCT
GAGTTTATTG GCGGTTTTGA GGCTGAAAAA GGCACTCAAT TTAGCTATTT TGATCTGCTA
TTAGGGCGAC TCTTTGAGGC TACCGAGGTG CCCAATACCG AGCTTGGACA CATTAATATC
GATGTAACCA GTGGTAAGTT AGCCCATTGG CTACCCGTGA TTAATGCCTT TATCGGTACT
GATAACAAGC CCGTCCGTAC TGGTATTTTG GTAGAAAAGG CAAATCATTC CGCTCTGTTC
CCTGCCGTTG TTGGGATAGA CGCCAATATC GGCAAATTTG ATTTACTGGG ACAGGGACTG
ACAGATTTAA GACTGAGCGC CAACCCTAAC GACAATGGCT GGCGTTTCGA TGCTAAAGCC
AGTGAATTTG AAGGAACTAT TGATTTTTAT CCTAATTGGA TGACACAGGG TCTGAAAGTG
GCCGCCAGCA AGTTTTATTT TTCGCCTGAA GTGAAGTCCG AAGGTGAAGC CGATTTTGCG
GCGGATCAGG TGCTGACAAA CTTGCCACCC GTTGCGGTGA ATGTGGACGA TTTTCGCTTT
TTCGATAAGT CATTTGGCAA GTTAGTGGTG CAAGCGAGTC CACAAGCCTC TGGCTACCGT
ATCCAGACAC TGTCTTTGAC GACGCCTGAA GTTTCCCTGC AGGGTAACGG TATTTGGCAA
CAGCAGAATG GTCAAAACCA AACCGAGTTA TCCGTCAGCT TAAATGCTAG CCAATTTCAC
CACTTGAGTG ACCAGCTTGG GATAAATCCG GGTGTAGACG AAGCACCATT AAAAGTGAAT
GCCGATCTTG CTTGGCAAGG TGCACCCTAT GCATTTTCCC TCGAAACCTT GAACGGTAAG
GTCAAATTTG AGTTAGGCAA GGGCCATTTA TCCCAAGTGA GTGATAAGGG CGCGCGGATT
TTCTCGCTGT TTAGTCTCGA TTCATTAGTT CGTAAATTAT CCTTAGATTT CAGTGATGTG
TTTGGGCAAG GGATGTACTT CAACTCCTTT ACTGGCAATC TGCAAATTGA TAATGGTGTG
GTGAAAACGA CAGACACTGA AATGGATGCG ATTGCGGGCA ATATGAAGGT GCGCGGCTAT
ACGGATCTCA CGACTGAAAG CTTAAACTAC GATATCCGCT TTGTACCGCA ATTAGCCTCC
AGTGTACCGA CTGTGGTGCT GCTGAGCACC AGTGCCTGGA CGCTCGGACT CGGCGCTTTT
GCCTTAACCA AAGTACTTGA ACCTGTGATT GAGGTGATTT CTGAAATCCG TTTCCGCGTG
AAAGGCACTA TGTCTGAGCC TGTGGTTGAG GAGCTTGAGC GTAAGAGTAA AGAGATTGAA
ATCCCCGAGT CGATTTTGCC TATGGTTGGC GGCGAGTTAC CTGCTACAGC TGAGGGCGAT
AAGCCTAAGG CGGATGGCGC AGCGGTAAAT AAAACTATAC CAGCACCTCA GACTGAATCT
GAAGCAAAAA CTGAGCAAAA TAAAGTCGGA TCTAAGGAAA AGATTGAACA GCCAGCGACA
GATATTCGTA AACCCAATGC TGAACCAGTG AGTTCCAAAG CTGCCCTGCC GATAAAACAA
ATTCAAGGAG AGAGTCATGC GCATCAGCTT GTTGCAATGT CAGAGCAGTC GCGACGTCAG
TGCGAACCTG TTGTTTATCG AATCGCAGCT TGA
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| Protein sequence | MATLFTAKKL SRFCWQLLAL ILVLFALTVS LIRGLLPQVD EVRQQLVEYV KSEYQINIQV
GELSAQWQAF GPAVTIDDLV IPPQEKLPVT VLVKQVQIKL DFWQSLLTTS PRIEDVNFEG
VHIALDMDKL SGRTTGRVSG QSTQTDWLYI LLLKQLERFS LEDASVQLLS LHNEYRPIHI
RHLNWRNSGM QHRGAGEIYL DNNAMVKESL SLQLDITGDA TAPDTLKGQI YLAAQSLDLG
EWASRQPNPY DPSKKLPLEG IVNLKAWFDV AHRSIRSGLV QFEPSWLQWS MQGQPQKFEI
QSGSIRWEPK ATGWEISSAD LDFVTNGEHW PELKLAAKQQ DDALYAYVSR VDLPTLFPLL
PLFPGVDLAV LKQWFHLAPE GSVGPIRLYQ AADQPLLAST SVTQLHWQKV EGIPNTQPLD
LKLQWQDETL VFSLPEQTYT LDFGDEFSAP LVLQGAELTG AFDTKRATLS MPHVQLANDD
IGLSAALKLD FSTAASMSLA ANVAVKNAAN ADKYFPIKAM GESLAEYLDG AIKAGQSQNA
QVLWQGALSS FPFEDNSGVF QAAFTLNNAE YQFQPDWPAV TDLSLDALFE NARMDIWVNQ
GKLMNVVADG AHVFIPELGE RSLLKIQADL VTDGSAATKV LQASPLADTV GETLKVVQVQ
GAVAGNLDIS IPLYEGEAED IRGQIVFDNT PVFIAQPGLQ LKAVTGTVQF ANEVVEGQGI
KSRLFEQPLE FSFATKPEGK DFTLNLDMKS RWDLSRLPQE LHNPLSGFYQ GKVAWGGNLS
MVFDEQGYQI QANLGSDLVG ATLKLPGVFA KPTDEPRPLM AEFSGDQQAA ILRVKLDKQA
EFIGGFEAEK GTQFSYFDLL LGRLFEATEV PNTELGHINI DVTSGKLAHW LPVINAFIGT
DNKPVRTGIL VEKANHSALF PAVVGIDANI GKFDLLGQGL TDLRLSANPN DNGWRFDAKA
SEFEGTIDFY PNWMTQGLKV AASKFYFSPE VKSEGEADFA ADQVLTNLPP VAVNVDDFRF
FDKSFGKLVV QASPQASGYR IQTLSLTTPE VSLQGNGIWQ QQNGQNQTEL SVSLNASQFH
HLSDQLGINP GVDEAPLKVN ADLAWQGAPY AFSLETLNGK VKFELGKGHL SQVSDKGARI
FSLFSLDSLV RKLSLDFSDV FGQGMYFNSF TGNLQIDNGV VKTTDTEMDA IAGNMKVRGY
TDLTTESLNY DIRFVPQLAS SVPTVVLLST SAWTLGLGAF ALTKVLEPVI EVISEIRFRV
KGTMSEPVVE ELERKSKEIE IPESILPMVG GELPATAEGD KPKADGAAVN KTIPAPQTES
EAKTEQNKVG SKEKIEQPAT DIRKPNAEPV SSKAALPIKQ IQGESHAHQL VAMSEQSRRQ
CEPVVYRIAA
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