| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3986 |
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| Symbol | lysC |
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| ID | 1171618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4123060 |
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| End bp | 4124415 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637345738 |
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| Product | aspartate kinase III |
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| Protein accession | NP_719516 |
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| Protein GI | 24375473 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTG TTGTCGCTAA ATTTGGTGGA ACCTCAGTTG CCGACTACGG CGCAATGAAT
CGCTGTGCCG AGATTGTGCT GGGTAATCCC GATTGCCGTT TAGTGGTGGT TAGCGCCTCA
AGTGGCGTGA CCAATCTTTT GGTTGAACTC ACTCAAGAGT CGATTAACGA CGATGGTCGT
TTGCAACGAT TAAAACAAAT TGCGCAAATT CAATACGCTA TCTTAGATAA ACTCGGTCGC
CCCAATGATG TTGCGGCCGC GTTAGATAAG CTGCTCAGCC GCATGGCGGT CCTGAGCGAA
GCCTTAGTCT CAGCACGCAG CAAGGCGACT ATGGATGAGT TATTGTCCCT TGGTGAACAA
TGTTCATCAG CATTATTTGC GGCAGTGTTA CGGGAAAAAG GCGCGAACTC GAGCGCATTC
GATGTGCGCC GAGTACTGCG TACCGACAGC CATTTTGGCC GTGCCGAGCC ACAAGTTGAA
CAGATTGCCT TGTTATCCCG TGAACACTTA TTGCCGCTGT TGTCTGAACA AGTGATTGTA
ACTCAAGGTT TTATTGGTGC AGATGAGGCG GGGCAAACCA CTACGCTTGG CCGCGGTGGT
AGCGACTATT CCGCGGCATT GTTAGCTGAA GCCTTAACAG CCTCTGCGGT TGAGATTTGG
ACCGATGTGG CGGGGATTTA TACGACTGAT CCACGGCTTG CACCAAATGC CCATCCTATT
GCCGAAATCA GCTTTAACGA AGCTGCTGAA ATGGCAACCT TTGGTGCCAA AGTGCTGCAT
CCTGCGACGA TTCTTCCAGC TGTGCGTCAA CAAATTCAAG TGTTTGTGGG TTCAAGCAAG
GAGCCAGAAA AAGGCGGGAC TTGGATCCGC CACCAGGTTG AAGATGCGCC TGTGTTTCGT
GCTGTGGCGC TGCGCCGTGA TCAAACCCTG CTGAATTTAC ACAGCCTACA AATGCTACAT
GCGCAGGGCT TTTTGGCCGA GACCTTTGCG ACCTTAGCAA GACATAAGAT CAGTGTGGAT
TTAATTACCA CCTCTGAAGT TAACGTATCA CTCACGCTTG ATAAAACTGG CTCCGACTCC
AGTGGCCAAG GTCTGTTAAG TGAAGCGTTG CTGCAAGAGT TATCACAACA CTGCCGTGTG
CGCGTGGAGG ATGGTTTAGC CCTAGTTGCG ATTATCGGTA ATCGCATAGC CACCACAGCC
GGTATTTGCC GCCGCGTGTT TGAAGTGCTG GAACCCCATA ATGTGCGCAT GATCTGCCAG
GGTGCGAGCC CGCATAACTT GTGTGTGTTA GTGGCCGAAT CTGAAGCGGC GCAGGTGGTT
AAAGCGTTGC ACGAAAATCT GTTTGAAGGC GCTTAA
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| Protein sequence | MSLVVAKFGG TSVADYGAMN RCAEIVLGNP DCRLVVVSAS SGVTNLLVEL TQESINDDGR
LQRLKQIAQI QYAILDKLGR PNDVAAALDK LLSRMAVLSE ALVSARSKAT MDELLSLGEQ
CSSALFAAVL REKGANSSAF DVRRVLRTDS HFGRAEPQVE QIALLSREHL LPLLSEQVIV
TQGFIGADEA GQTTTLGRGG SDYSAALLAE ALTASAVEIW TDVAGIYTTD PRLAPNAHPI
AEISFNEAAE MATFGAKVLH PATILPAVRQ QIQVFVGSSK EPEKGGTWIR HQVEDAPVFR
AVALRRDQTL LNLHSLQMLH AQGFLAETFA TLARHKISVD LITTSEVNVS LTLDKTGSDS
SGQGLLSEAL LQELSQHCRV RVEDGLALVA IIGNRIATTA GICRRVFEVL EPHNVRMICQ
GASPHNLCVL VAESEAAQVV KALHENLFEG A
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