| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3797 |
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| Symbol | |
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| ID | 1171441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3948765 |
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| End bp | 3950681 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345567 |
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| Product | U32 family peptidase |
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| Protein accession | NP_719334 |
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| Protein GI | 24375291 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGC CAGAGATTTA CACACCTGAG AAACTTTCTC ACGTTAATAA CCGTTTAGAG
TTATTGGCGC CCGCTAAAAA TGCCGATTAT GGTATTGAAG CCATTCGCCA TGGTGCCGAT
GCGGTTTATA TCGGTGGTCC TGCATTTGGG GCGCGTGCGA CGGCGGGTAA CAGTGTGGAG
GATATCGCGC GCCTGTGTAC TTTTGCGCAT AAGTACCATG CTCAGGTGTT TGTCGCCCTT
AATACCATTT TGATGGACGA TGAACTGGCA GTGGCTGAAA AACTGATTTG GGACGTGTAT
AACGCTGGCG CCGATGCGCT GATTGTGCAG GATATGGGGG TTTTACAGCT CAACCTGCCG
CCGATTGCAC TGCACGCCAG TACCCAAATG GATAACCGTA ATCCCGAGAA AGTCGCCTTT
TTGGAGCAAG TGGGATTCTC CCAAGTGGTG TTAGCTCGCG AGCTTGGTTT AAGCCAAATT
CGTGAGGTTG CGGCTCACAC CAATATGCAG ATTGAGTTCT TTATCCATGG CGCGCTTTGC
GTTGCTTATA GTGGCCTATG TAACTTAAGT CATGCCTTTA GTAATCGCAG TGCTAACCGC
GGTGAATGTT CGCAAATGTG CCGCTTACCG GGTAATCTTA AGACTCGTCA AGGGGATGTG
TTAGCGAAAA ATGAGCACTT ACTTTCATTA AAAGACAATA ATCAAACCGA TAACCTTGAA
GCCCTGATCG ATGCTGGCGT ACGTTCGTTC AAAATCGAAG GCCGTTTAAA AGATTTAAGT
TACGTGAAGA ACGTGACTGC TCATTATCGC CAAAAACTCG ATGCTATTAT GGCGCGTCGC
CCAGAGTTTG TGGCTTCATC CCATGGCCGT ACTGAGCATA CTTTTACCCC AGATCCAGAA
AAAACCTTTA ACCGTGGCAG TACCGACTAC TTTGTCCATG AGCGTAGCCA AGGGATTAAA
GATTTCCGCT CGCCTAAATA TATTGGCCAA GATGTCGGTA AAGTGGTCGC TATTGGTAAG
GACTTTATTC AAGTCAGTTC AACCCACGAA TTTAATAACG GTGATGGTTT AGCTTATTTT
CCACCCAATT ATGCGATGGC AAAGCAGTCC GACGATAAGT TGCAAGGTTT ACGGGTAAAC
CGCGCTGAAG GCCATAAGCT GCATGTGTTA CAAGTCCCGC GGGATTTACG TGTTGGTATG
ACCTTATACC GTAACCATAA TCAGGCATTC GAAGCCTTGT TAGCTAAAGA GTCGGCCAAG
CGTATTATTG CTGTGGACAT GCGCTTAATC GATACGACGG CGGGTGTGGC ACTGACCTTA
ACGGATATGT ATGGCTTGAG CGCCTCGGTT GAGTTAGCGG TAGAAAAAAC GCCGGCAACC
GATGCTGAAA AAACCTTACA GACTATTCGT ACACAACTGT CAAAATTGGG TAGCACCGAC
TTTGTTGCTC GTCAAATCAG CATTGAAACT GCCGAGCCTT GGTTCCTGCC TGCATCAACG
CTCAATGGTC TTCGCCGTGA TGCGGTTGCT GCACTTGAAC TTGCCCGCAT AGAAGGCTAC
CAACGGCCAA AACCTTGGAA ATATAACCAA GATGCCGTCT ATCCATTCAA ACACTTAAGT
TACTTAGGTA ACGTGGCAAA CGAAAAGGCC AAAGATTTTT ATCAACGCCA TGGCGTGATT
GAAATTCAAG ATACCTATGA GAAAAACGGC GTCACTGAAG ACGTGCCTTT GATGGTGACT
AAGCACTGTC TGAGATTTAA CTTTAATCTT TGCCCTAAGG AAGTACCAGG TATCAAGGCT
GACCCTATGG TGCTCGAAAT TGGTAACGAT GTACTTAAGT TAGTATTTGA TTGTCCTAAG
TGCGAAATGC TTGTTGTCGG TGAAAACCGC CAGGTTCGCG GCCAAAAAGC ACTTTAA
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| Protein sequence | MSQPEIYTPE KLSHVNNRLE LLAPAKNADY GIEAIRHGAD AVYIGGPAFG ARATAGNSVE
DIARLCTFAH KYHAQVFVAL NTILMDDELA VAEKLIWDVY NAGADALIVQ DMGVLQLNLP
PIALHASTQM DNRNPEKVAF LEQVGFSQVV LARELGLSQI REVAAHTNMQ IEFFIHGALC
VAYSGLCNLS HAFSNRSANR GECSQMCRLP GNLKTRQGDV LAKNEHLLSL KDNNQTDNLE
ALIDAGVRSF KIEGRLKDLS YVKNVTAHYR QKLDAIMARR PEFVASSHGR TEHTFTPDPE
KTFNRGSTDY FVHERSQGIK DFRSPKYIGQ DVGKVVAIGK DFIQVSSTHE FNNGDGLAYF
PPNYAMAKQS DDKLQGLRVN RAEGHKLHVL QVPRDLRVGM TLYRNHNQAF EALLAKESAK
RIIAVDMRLI DTTAGVALTL TDMYGLSASV ELAVEKTPAT DAEKTLQTIR TQLSKLGSTD
FVARQISIET AEPWFLPAST LNGLRRDAVA ALELARIEGY QRPKPWKYNQ DAVYPFKHLS
YLGNVANEKA KDFYQRHGVI EIQDTYEKNG VTEDVPLMVT KHCLRFNFNL CPKEVPGIKA
DPMVLEIGND VLKLVFDCPK CEMLVVGENR QVRGQKAL
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