Gene SO_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3654 
Symbolung 
ID1171313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3808971 
End bp3809627 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content49% 
IMG OID637345443 
Producturacil-DNA glycosylase 
Protein accessionNP_719196 
Protein GI24375153 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTGGC CAGCATTTAT CGACCATCAA CGTACACAGC CTTACTATCA ACAGCTGATC 
GCGTTTGTGA ATCAAGAGCG ACAAGTAGGC AAGGTAATTT ATCCTCCCAA AGAGGATGTG 
TTTAATGCAT TTAAGACTAC GCCGCTGGAG CAAGTACGCG TAGTGTTAAT TGGCCAAGAT 
CCCTACCATG GCCCTGACCA AGCCCATGGT TTGTGTTTCT CCGTTAAACG TGGGGTTAAA 
GCACCGCCTT CGCTTGCCAA TATGTATAAA GAATTGGTGA ACGATATTCC CGGCTTCCAC 
ATTCCCAATC ATGGCGATTT AACTCAATGG GCAGAGCAGG GGATTTTAAT GCTTAATACC 
GTGCTGACGG TTGAGCAGGG GCAAGCGCAT TCCCATGCCA ATGCGGGGTG GGAAATCTTT 
ACGACTGAAG CGCTAAAACT GCTTAATGCC CAGGAACGCC CGATTATCTT CGTGCTGTGG 
GGCAGTCATG CCATCAAAAA AGGCGCGGTG ATTACCGCGC CACAACACCA AATTCTCTCT 
GGGCCGCATC CATCACCGTT ATCGGCTTAT CGCGGATTTT TTGGCTGTGG GCATTTTTCG 
AAAGTGAATC AATTGCTAAT GGCACGGGGT GAAGCGCCGA TTCAATGGCA GATTTAA
 
Protein sequence
MTWPAFIDHQ RTQPYYQQLI AFVNQERQVG KVIYPPKEDV FNAFKTTPLE QVRVVLIGQD 
PYHGPDQAHG LCFSVKRGVK APPSLANMYK ELVNDIPGFH IPNHGDLTQW AEQGILMLNT 
VLTVEQGQAH SHANAGWEIF TTEALKLLNA QERPIIFVLW GSHAIKKGAV ITAPQHQILS 
GPHPSPLSAY RGFFGCGHFS KVNQLLMARG EAPIQWQI