Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3382 |
Symbol | |
ID | 1171060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3520699 |
End bp | 3521499 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637345187 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | NP_718936 |
Protein GI | 24374893 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTCTT TACTCAGCAA AAAAATCAAC ACAGTGCTGG TAACAGGGGC AAGCTCCGGT ATCGGTTTGC AGTTAGCGAA GGATTATTTG GCCTTAGGTT GGCATGTGAT TGCCTGTGGC CGTGACGCCA CAAAACTTGA TTTGTTGGCG CAGACTGAAT TGATAGGCGC CACTTGCTTG AGTTTTGATG TTACTGATCG CCTTCAAGTC CAGCAGACGG CCTCTGAGCT AGGCGATATG CTCTCAAGTA GTGAATGTCT ATTAGATGTT GTTATCCTCA ACGCAGGTAG TTGTGAGTAT ATCGACGATG CAAAACATTT TGACGATCAG CTCTTTGAGC GGGTAATTCA TACTAACTTG ATTGCGATGG GCTACTGTTT AGGGGCATTT TTACCTCTAA TGCCAAAGAG CGCGCAATTA GCCTTGATGA GTTCCAGCGC GATTTATTTG CCTTTTCCCC GTGCAGAGGC TTATGGCGCA TCTAAAGCGG GCGTTAAGTA CTTGGCCGCG AGTCTCTCAC TCGATCTTGC GCAAGATAAT ATTGGTGTCA GCGTGATTTG CCCAGGATTT GTGGCAACAC CTTTAACCGC CAAAAATGAC TTTGCCATGC CAATGCAAAT TGATGTGCAT GAGGCTTCGC TGGCGATTCG TGTTGGAATA GAACGCGGTG ATGCAGAGAT CCATTTTCCA AAACGATTTA CTTATTTACT GAAATTGATG TCATTTTTAC CTGCATTTGT ATGGCAAAAA ATGATCCAAA GAGATAGCCA AGCACAAGCG CTAAAGGGCA CCAAAAGATG A
|
Protein sequence | MASLLSKKIN TVLVTGASSG IGLQLAKDYL ALGWHVIACG RDATKLDLLA QTELIGATCL SFDVTDRLQV QQTASELGDM LSSSECLLDV VILNAGSCEY IDDAKHFDDQ LFERVIHTNL IAMGYCLGAF LPLMPKSAQL ALMSSSAIYL PFPRAEAYGA SKAGVKYLAA SLSLDLAQDN IGVSVICPGF VATPLTAKND FAMPMQIDVH EASLAIRVGI ERGDAEIHFP KRFTYLLKLM SFLPAFVWQK MIQRDSQAQA LKGTKR
|
| |