Gene SO_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3313 
Symbol 
ID1170998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3464948 
End bp3466072 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content49% 
IMG OID637345121 
Producthypothetical protein 
Protein accessionNP_718867 
Protein GI24374824 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA ACGAAATAAA CGCGTCAGTA GAACCTGTTA CAGCAAATGA AGCTGAGTCG 
ACGCCTGATG TAACACTCGG AAGTGTACTT AAATCGGCCC GTGAGCAGAT GGGGTTGAGT
ATTGCGCAGA CCGCGGTGAA GCTGCATTTG CGCCCTGGTA TTGTTGAAAA TCTCGAAGCC
GATGATTTTT CCAATATTGC CTCATCGACC TATGTTCGCG GCTATGTTAA AAATTATGCG
CGTATGCTGG GGGTCGACAA CGCCCTGATT GAGGCATGTC TTGCAAGACA AGTGCCCTTT
GTGACACAGC CTCCGATGCA AAGCTTTTCC CGTAAGACGA CTTATCAAGC TCGAGACACA
AAATTAAAGT GGCTGAGCTT TTTTATCGTC ATAGTATTGC TTGGTCTGTT CGTGGTTTGG
TGGATGCAGA GAGCGACACT TGTTACCCAT GTGGACATCT CAAAACCCAC TGCTGAAGAG
GTAGCTGCAG CGAATCAAAC CCTGCCGGGT GATGTCTTGC TAACTGAAAC GGATGCAAGT
GCACGTTTAA GTGAGATTGC GGTCAACGGC TCAATGGCAA CTGATGGTCC GGTAAAAGAT
ACCGATGTTA GTTCTATCGA TCCTAACACG AACGTTATGA CGGCTATGGA AGGCGAGCAA
ACAGCTAACT CAAGCAACGA GTCTAGTCGC AATAGTGTTG CAAAGCCTAA CCAGACTGTA
ACTGCATCAG GTGCGGTGCA AACGCCATCC ACCACGGCGA CTGTAACAGT TCCGGTGCAA
AACACCGCTT CTGCACAAAC TCAAGTAACC GCTAATGCCA GTGCGACCAA TGTCACCAGC
CCAACGACCA ACGCGCAAAC TATGCCAGCT GTAGCAGGGC AATCAACGCT CAATATTCAA
CTGACGGGCG ATTGTTGGAT CAACATTGTC GATGCAAACG GTAAGGCGAT TGTTGATGGC
GTTCGTGGTG CAGGGGCAAA TATTCAAGCT AGTGGTGTGC TGCCATTTAA AGTGATCCTT
GGTGCGCCGA CTGTCGTTTC GAGTTTTACG GTTGATGGAA AAGCCATTAG TCTTGCTGAA
TTTCCTAAGG GTCGCGTTGC GCGTTTGACT ATTCCACAGG CTTAA
 
Protein sequence
MKDNEINASV EPVTANEAES TPDVTLGSVL KSAREQMGLS IAQTAVKLHL RPGIVENLEA 
DDFSNIASST YVRGYVKNYA RMLGVDNALI EACLARQVPF VTQPPMQSFS RKTTYQARDT
KLKWLSFFIV IVLLGLFVVW WMQRATLVTH VDISKPTAEE VAAANQTLPG DVLLTETDAS
ARLSEIAVNG SMATDGPVKD TDVSSIDPNT NVMTAMEGEQ TANSSNESSR NSVAKPNQTV
TASGAVQTPS TTATVTVPVQ NTASAQTQVT ANASATNVTS PTTNAQTMPA VAGQSTLNIQ
LTGDCWINIV DANGKAIVDG VRGAGANIQA SGVLPFKVIL GAPTVVSSFT VDGKAISLAE
FPKGRVARLT IPQA