Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3273 |
Symbol | |
ID | 1170966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3412129 |
End bp | 3414597 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637345089 |
Product | hypothetical protein |
Protein accession | NP_718827 |
Protein GI | 24374784 |
COG category | [S] Function unknown |
COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTAC AAGCCCACAT TTTGAATAAC TTTGCGATCA GTCGCTTTAA CGAATACTAC TTACCTAGTA TTAACCGCCA CACCTTTGAG GGTATTGACT CTAAAACCTT ATACAATCGT CGTTTCAGAC AATCGTTTTC TCAACAAGAT AAGCTGCATA TTGTGGTTGG AATGGATTCT GGACTACTGG CCAACTACGT GTTGGAGCAG GATCTCCCCA TCGGCAGCAA ATTTATTTTT GTTGAATTAG ATGAAGTCAT GCCCTTATTG GTCATCGATA TCCCCGCAGA CAAACAATCT GCAATCAGTA TTGTTAATGA GGCCAGTTTT ATTGAGTTAA TGGAGCAAGA TGACATAAAA GTCTTTTTAA TCAAAGGCCA ATATGAAATC CATCAATCCT TAGGCGTTGC ATCCCAGCAC TTAGATGTCT ATATTGCCTT ATTCAATCGC ATCGAAACCA AAGTCCAAGA TGATTATTTC ACCCATAGGA TCGGTTTTAC CCAAAAAATC TTTTTCCAAA CCCAGCTTGA AAATATTGCC GATAATCAAA CACCAGCCAA AATACTACGG AATACATTTA GCGGAAAAAC CTGCTTAGTC ATTGCTGGCG GTCCTTCTCT TGACGAACAT ATCGATTGGA TAAAACACAA TAACGACAAT TTATTTATTA TCGCCGTTTC ACGCATCGCG GGAAAATTGG CCGATAATGG CATATCCGTA GACATAATTA CCTGCGTCGA CCCTCAGGAT TTTAGTTTCG ACGTAAGCCG TGACATGTTT AAATTAAGCC ACCAAACCTT GCTGGTAAAT TCCTATCACG TTAGCCATAA AATCCTCTCC CAATGGAATG GCCCTAAAGC CTATTTGGGC CAACGCTATC CTTGGAGTGG CAAGCATGAT CATGACAATA TCATCACCGT AGGCCCAACG GTCACCAACA GCTCAATACG CCTTGCTATC GAAATGGGCT TTACTACCCT ATTGCTAAGT GGTGTCGATT ATTGCTATTC AAAATCCGGT TATAGTCATG CAAAAGGTAC GGTTGAAGCC AGCATTGGTC CAAGTCTAGG CCGTAATAAT AAATGGGTTG AAACCTACGC TGGTCAGCCA GCTGAAACTC CTATTCAGCT CATTCATGCA ATGGAATCCC TTGCTGAGGA GGCCAAGACC TATCCTGATA TTAGCTTTAT TAATCTATCA ATTAATGCAG CTAAAATTGA GGGTATTGTT CACATGCCAA CAACGGCAAT AGTGCTTTCA TCCTTTACAG ATAAATCCGT CATTGAGGTG ATCAACGAGG CTACTCCCGA TACTGAGGAT GACTTAAACT CAGCAATACA AGAGTGCAGT AAAGCCATTA GCCAATTAGA AACATTAAGG CAGCTAACTA AAAAAGCACT TACGCTTACA AAAACACTGA ATGAGGATCC GCAGGATTCC TGCTTAACGC TGGATAAAAT CAACCAAATA GAAGAAGAGA TTAATCTTCA CTACGCCACA CTGTCTCGGT TGATTAAAAC CTACGGTTAT TATGAGTTCT CACATTTTCT CACTGCAAGA AATACCGATA GTTGGACACA AACCCATATC AATGAAATGA CGCTAAACTA TTATGAAGCC TTCAATACGA TATGCCATGA TATTTTAGAA CTCGCTAAAA AATCCTATGA CAACCTTCAA TTTCGACAAC TCGAATTAAA TTCCACCTCA TTAACACCGC TTGCGCCCAT TTGGTTGAAA AAAACTCAAT CAGGCCGTGT TTATATTTGG GATAAATACC ATAAACATCC TACATTATCT GAATCCGAGC AGGTGATATG GAATGAATTA ACAGAACAAT TTTCTCAGGA TATTACCCTA GTAAGCCCAG TCTATGTTGA GGCATTAAAT AAGGCGTCTA CTGCGGAAAA TATCTACACA AAAATCATGA CGCTTTACGC CATGAGAAAC AATCAAGGTC TATCGATAAC AGTAGAAAAC TTACTGCCAT TCGTCGATGG CAATCCAGAA TTGCAAAGAC TGTATCACTT GGCTCTCGCG TTACAACTCA GCCTAGAGCA GCAGTATCAG CAAGCCTTAG ATGCACTATT AGCATTACCT GAAGATCTCT GTACTGAGAT GGAATTAAAA CACATTATTT TGCTTGCGCT CAAACTTGAA AAACTCGATC TCGCCGAGTC AACCCTTGTC AAAATTTTGG CCTACAGTGA CGAGTATATG CCGCAATATG CGCATATCCT TAAGCTATGC GGGAAAATTC AAGAGTCAGT CAACGTCTAT CTAGACTACT TAAAAAAGTA TGCATCAGAC ACCCAAACGT GGATAAAACT TGGCTTATTT ATGATTGAAC TTGGCCAAGC TGAAGGCGCA CACACTGCGT TTAGCAATGC CCTCAATGCC GATCCGAGCA ATCAAGTAGC ACAACACTAC GTGGCAGAAC TCACCCGAAT CATGGCTGAA GCACAATAA
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Protein sequence | MQLQAHILNN FAISRFNEYY LPSINRHTFE GIDSKTLYNR RFRQSFSQQD KLHIVVGMDS GLLANYVLEQ DLPIGSKFIF VELDEVMPLL VIDIPADKQS AISIVNEASF IELMEQDDIK VFLIKGQYEI HQSLGVASQH LDVYIALFNR IETKVQDDYF THRIGFTQKI FFQTQLENIA DNQTPAKILR NTFSGKTCLV IAGGPSLDEH IDWIKHNNDN LFIIAVSRIA GKLADNGISV DIITCVDPQD FSFDVSRDMF KLSHQTLLVN SYHVSHKILS QWNGPKAYLG QRYPWSGKHD HDNIITVGPT VTNSSIRLAI EMGFTTLLLS GVDYCYSKSG YSHAKGTVEA SIGPSLGRNN KWVETYAGQP AETPIQLIHA MESLAEEAKT YPDISFINLS INAAKIEGIV HMPTTAIVLS SFTDKSVIEV INEATPDTED DLNSAIQECS KAISQLETLR QLTKKALTLT KTLNEDPQDS CLTLDKINQI EEEINLHYAT LSRLIKTYGY YEFSHFLTAR NTDSWTQTHI NEMTLNYYEA FNTICHDILE LAKKSYDNLQ FRQLELNSTS LTPLAPIWLK KTQSGRVYIW DKYHKHPTLS ESEQVIWNEL TEQFSQDITL VSPVYVEALN KASTAENIYT KIMTLYAMRN NQGLSITVEN LLPFVDGNPE LQRLYHLALA LQLSLEQQYQ QALDALLALP EDLCTEMELK HIILLALKLE KLDLAESTLV KILAYSDEYM PQYAHILKLC GKIQESVNVY LDYLKKYASD TQTWIKLGLF MIELGQAEGA HTAFSNALNA DPSNQVAQHY VAELTRIMAE AQ
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