Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3190 |
Symbol | |
ID | 1170883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3328151 |
End bp | 3329431 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637345006 |
Product | polysaccharide biosynthesis protein |
Protein accession | NP_718746 |
Protein GI | 24374703 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTTG ATGTAGTAAA TGCCAAAATT GGCATTATTG GTTTAGGCTA TGTAGGATTG CCGCTAGCAG TTGAATTTGG TAAACAGCGT TTGACAATTG GGTTTGATAT CAATCAAGCT CGAATCAATG AACTCAGTGC TGGCCACGAT AGTACGTTAG AGTGTTCTGA TACTGAGTTA GCTGAAGCAA AAAAACTAGT TTATACAACA TCACTAGAAG CGCTCAAAGA ATGTAATGTC TTTATTGTTA CTGTTCCAAC GCCGATTGAT GAGCATAAGC AGCCTGATTT AACACCCTTG ATCAAAGCTT CAGAAACCTT AGGTAAAGTC ATCAAACACG GCGATGTAAT CATCTATGAA TCTACCGTTT ACCCAGGTGC GACTGAAGAA GAATGTATCC CGGTTGTAGA GCAGGTATCA GGCCTTAAGT TTAATCAGGA CTTTTTCGCG GGGTACTCGC CAGAGCGTAT TAACCCTGGT GATAAAGAGC ATCGTGTCAC TAATATTTTA AAAGTGACTA GTGGATCCAC GCCTGAAGTA GCTGAATATG TAGACCAGTT ATACAAATCT ATTATTGTAG CTGGCACCCA TAAGGCATCA AGTATCAAGG TGGCCGAAGC AGCTAAAGTG ATTGAAAACA CTCAGCGAGA TGTCAATATT GCGCTGATTA ATGAGCTATC TATCATCTTT AACAAGCTTG GTATAGATAC GCTTGAAGTG CTTGAAGCAG CTGGCACCAA GTGGAACTTT TTGCCATTTC GTCCTGGCTT GGTTGGTGGC CACTGTATCG GTGTAGATCC TTACTATTTA ACTCATAAAG CGCAAAGCGT GGGTTATCAC CCGGAGATGA TCTTAGCCGG TCGCCGCCTT AACGACGGTA TGGGCCAGTA TGTGGTGTCT CAATTGGTTA AGAAAATGCT TAAAAAGCGT ATTCACGTAG AAGGCGCAAA CGTTCTTGTG ATGGGCTTGA CCTTTAAAGA AAACTGCCCG GATCTACGCA ACACCAAAGT AGTGGATATT GTCCGTGAGC TTAAGGAATA CAATATTAAT GTGGATATTG TTGACCCTTG GTGTGAAAGC CATGAAGCAG AACAAGAATA TGGATTAACT TTGTGCGGTC AACCTAAAGT GAACCATTAT GATGCGATTA TTATAGCTGT TTCCCATAAC GAGTTTCGTG CAATGGGCGC TGAGGCAATA CGTGCATTAG GTAAACCAGA ACATGTGTTA TACGACCTGA AATACGTGCT AAATAAAGAA AGTGTAGATA TGCGTTTATA G
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Protein sequence | MMFDVVNAKI GIIGLGYVGL PLAVEFGKQR LTIGFDINQA RINELSAGHD STLECSDTEL AEAKKLVYTT SLEALKECNV FIVTVPTPID EHKQPDLTPL IKASETLGKV IKHGDVIIYE STVYPGATEE ECIPVVEQVS GLKFNQDFFA GYSPERINPG DKEHRVTNIL KVTSGSTPEV AEYVDQLYKS IIVAGTHKAS SIKVAEAAKV IENTQRDVNI ALINELSIIF NKLGIDTLEV LEAAGTKWNF LPFRPGLVGG HCIGVDPYYL THKAQSVGYH PEMILAGRRL NDGMGQYVVS QLVKKMLKKR IHVEGANVLV MGLTFKENCP DLRNTKVVDI VRELKEYNIN VDIVDPWCES HEAEQEYGLT LCGQPKVNHY DAIIIAVSHN EFRAMGAEAI RALGKPEHVL YDLKYVLNKE SVDMRL
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