Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3176 |
Symbol | |
ID | 1170870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3314278 |
End bp | 3315399 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637344993 |
Product | glycosyl transferase, group 1 family protein |
Protein accession | NP_718732 |
Protein GI | 24374689 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA TACATGTTAT TGTAGGTTTG CCTGCTAGCG GTGCGGAATT ATTTCTACAG CGATTATCTT TTGAACAACG TAATGCAAAT TACCATATCA CCGTTATCAG TTTAACAACT GAAGGCACCC TTGGCGAAGC ACTCAGGTCT CGTGGTGTAA ACGTATTGTT CTTAGGTTTA AGCGGTGTTC TATCTGTTCC CCTAGTTGTT TACAAATTAA GAAAGCACAT ATCGAACATT CGGCCGGATA TAATACAAAG TTGGATGTAT CATGCAGATT TTTTCAGCAG CCTTGCAATG TTCGGTCTAA ACAAAAAACT TATCTGGTCT GTTCGTTGCT CTAATATTCC TGCAGGAAGT TACTTTACAT TAGCCCTAAT GAAAATTTGC TCTCTCTTGT CCTATGTGTC TCCTGCGAGA GTTTGTTATG TTGCTGAAGC ATCGAAAGTT TTTCATCAGT CTCAAGGATA TTCTCCAAAA AAATCCATAA CCATCGCAAA TGGTTATGAC TTTAGTAGTC TTGTTTATAG CGAAAAAAAG AGAAACTCTT TTAGAGAAAG TCTTTCATTA GATAAGCATG TAACAGTTTT CGGTCTTGTT GGCCGGTTTC ATAAAGATAA AGGTCAAGAT ATTCTGTTAG AAGCTTTTTC AAAACTGAAA GCGGATATTA GTAATTACAA GATTTTACTT GTTGGTCGAG AGTGCAATAA TGATAATCAT CAGCTTGTTA ACTTAATTAA TAGTTATGGA TTAGATGAAA ATGTTATCCT CCTTGGCGAA CAGAATGATA TATCTGGTTT GTTAAGTGCA ATGGATATTT ATGTTATGGG TTCTCGTACT GAAGGCTTTC CAAACGCATT AGCAGAGGCA ATGTCTATCG GTTTACCATG TATTGCAACG AATGTTGGAG ATGCTGCATT ACTTGCTGAT AAATACGCGG TTTTGTCGGA AGCCAATTCT AATTCTTTAG CTGATGCTAT TCTAGCAGTG GTCAAGATGC CTGTCGAACA GCGTAAAATG CTTGGTATTC ATGCTGCTGA CCACGTGAGA AAATCATTTT CTATAGTTGA AATCAAAAAA CTTTACGATC AGCTATATCA TTCTTTGTTG GAGAAAAAAT AA
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Protein sequence | MNIIHVIVGL PASGAELFLQ RLSFEQRNAN YHITVISLTT EGTLGEALRS RGVNVLFLGL SGVLSVPLVV YKLRKHISNI RPDIIQSWMY HADFFSSLAM FGLNKKLIWS VRCSNIPAGS YFTLALMKIC SLLSYVSPAR VCYVAEASKV FHQSQGYSPK KSITIANGYD FSSLVYSEKK RNSFRESLSL DKHVTVFGLV GRFHKDKGQD ILLEAFSKLK ADISNYKILL VGRECNNDNH QLVNLINSYG LDENVILLGE QNDISGLLSA MDIYVMGSRT EGFPNALAEA MSIGLPCIAT NVGDAALLAD KYAVLSEANS NSLADAILAV VKMPVEQRKM LGIHAADHVR KSFSIVEIKK LYDQLYHSLL EKK
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