| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3103 |
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| Symbol | |
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| ID | 1170792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3229020 |
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| End bp | 3232283 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344908 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_718665 |
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| Protein GI | 24374622 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACG CTACTGAATC TCCGATGACA CTGGGCATTT CAGGCCGAAT TGCGGCCGCA
TTTCAAAATA GTGCCATCAC ACCGCTACTG GCACTTTTGG GGCTCTTGCT TGGCTTGTTT
GCTATTTTAG TCACCCCAAA AGAAGAAGAA CCCCAGATTG ACGTCACCTT TGCCGACGTT
TTTATTCCCT TTCCTGGCGC GACACCGACA GAAGTGGAAA ACTTAGTCAC CCTACCCGCT
GAACAAGTTA TATCCGAAAT CAAAGGGATA GATACGCTTT ACTCTTTCTC TCAACCCGAT
GGCGCGATGA TCATCGTGAT TTTTGAGGTC GGCGTGAGCC GCAACGATGC CATTGTGAGT
CTCTACAACC AGATTTATTC CAATATGGAT AAACTGCCGC AGGGCGCGGG TGTGGGTGAG
CCATTAATTA AACCTCGGGG CATTGATGAT GTGCCCATTG TTAGCCTGAC ACTCTGGTCT
AAAGATCGGG GGTCAAAGGA CCAGCAGGTA TCTGCTGAGC AGCTCACCCA TGTGGCTCTC
GGTTTAGAAA CAGAGATAAA ACGTATCCCA GGTACGCGCG AAATTTACAC CGTTGGCCAA
CATGAGATGG TAGCTAACGT GCGGATCGAT CCCGCTAAAA TGAATAGCTT TAATCTGACC
TATGACAAAT TAAGACAAAG CCTGAATGAT AATAACCATA TCTCGATGCC AGCCTCTTTA
GTGCAGGGTA ATCAAGAAAT TAAGGTTCAA GCTGGGCAAT TTTTACAATC CATTGATGAT
GTTAAACAGC TGGTAGTGAG TATTTCGCAG GATAAACAGG GTAAACCCAT CCCCGTTTAT
TTGGCTGATA TTGCTGACAT CAGTTTAAAG AGTGATATTC CTAGCCAAAG CGTTTGGCAT
AGCGACAAGA CTGATATTTA CCCCGCGGTG ACCATAGCCA TTGGTAAACA ACCGGGGCAA
AACGCCGTCG ATATTGCCGA TGCAGTGCTC GCACGCATCG CTAAAGTGGA TAACGTGCTT
ATCCCCAATA ATGTTGAAGT GACAGTGTCG CGCAACTATG GCGAAACTGC GGCAGATAAA
TCTAATACAC TTATTCTTAA GCTTATTTTT GCTACCACTG CCGTTGTCGT GCTGGTATTT
TTGACCATGG GTGCCCGCGA GTCATTGGTG GTAGGCGTTG CCATTATCAT CACCTTGGCG
ATCACTTTGT TTGCCTCTTG GGCGTGGGGA TTTACCCTAA ACCGTGTGTC GCTATTCGCG
CTGATTTTCT CTATCGGGAT CTTGGTCGAC GATGCCATTG TGGTGGTGGA GAACATCCAT
CGGCATATGG CGCTGGGTAG AAAATCCTTT AGTGAGCTCA TTCCTGTTGC TGTAGATGAA
GTTGGCGGAC CGACGATTCT CGCCACCTTT ACCGTGATTG CAGCACTATT ACCGATGGCC
TTTGTGTCAG GATTAATGGG GCCTTATATG AGCCCGATCC CCATCAATGC CAGTATGGGC
ATGCTGATCT CCCTCGTGGT GGCATTCGTA GTCACGCCAT GGTTAAGCCG AAAACTGCTA
AAACACCATG ATGCTTCTTC GACAGATAAA AGCCACCATC AAGAAGCTGG GGCAAATGAA
ACCGAGAACA AAATGATCCG TTTGTTTACC CGCTTGATCG GCCCATTTTT GCAGGATAAA
GGTGGCCGTA AAGCTCGTAT TGGACTCGCT GCGGGTATAT TTGTGCTTAT CGGTATCGCT
GTCGCCTTGC CAGTCGCTCA GCTCGTGGTG TTAAAAATGC TGCCATTCGA CAACAAATCA
GAGTTTCAAG TGATGGTGGA CATGCCAGAA GGCACACCGG TGGAACAAAC CCAACGCGTG
CTTCAGGAAC TGAGTCGTTA TCTTGCTACT GTGCCAGAAG TTGAGCATTT ACAACTCTAT
GCAGGCACCA ATGCACCAAT GAACTTCAAC GGCTTAGTCC GTCATTATTT CCTGCGAAAT
AGCCAAGAGC TAGGCGATAT TCAAGTCAAT TTAGTCGATA AAAAGCACCG CAAACGCGAT
AGCCATAGCA TTGCGATCTC CGTGAGAGAA GAGCTACAGC AAATAGGTGC CCCATATCAA
GCCAATATTA AAGTGGTTGA AGTGCCACCA GGCCCTCCAG TCTGGTCACC GATTGTGGCT
GAAGTGTATG GCCCAAGCCC TGCTATCCGC GAGCAGGCCG CCTATGAAAT GCAGTCACTA
TTTCGCGAAA CCAAGGATGT CGTCGATATC GATATCTTTT TACCCGCCGC ACAGCAAAAG
TGGCAAGTGA TGATCGACCG CTCGAAAGCT AGCCTCATGG CAGTCCCCTA TAGCAATATC
GTTGATTTAA TTGCGACTTC GGTTGGTGGC AAAGATGTAA GCTACTTGCA TATTGCTCAG
CAAAAACAAC CCGCGCCTAT CCGACTTCAG TTGCAAGAAG GCGCTAAAAT CGATTTAGAA
CAAGTGCTAA ACATGAAGTT ACAAAGCCAA ACCGGGCAAT CCGTGCCCGT GTCTGAGCTG
GTGACCATTA AGCGTGGCAA CATTGATGCA CCTATTATCC ATAAAAATAT GGTCCCAATG
ATTATGGTTG TCGCCGATAT GGCTGGCCCG CTGGACAGCC CACTCTATGG TATGTTCGAT
ATGGCGAGCA AAATCGACGG CGAAGGAGGT TTAGGCTTCG ATCAACATTA TATCCATCAA
CCAACGGGGC TGGACTCAGT GGCCGTGCTG TGGGATGGAG AGTGGAAAAT CACCTATGAA
ACCTTCAGAG ACATGGGCAT AGCCTATGGC GTAGGGATGA TTGCGATTTA CTTATTGGTG
GTCGCCCAAT TTAGATCCTA TCTCGTGCCA CTGATCATTA TGGCGCCGAT CCCCTTAACC
GTGATTGGTG TTATGCCAGG GCATGCGCTG CTCGGTGCGC AATTTACCGC AACCTCGATG
ATAGGCATGA TTGCCTTAGC GGGGATCATC GTGCGTAACT CAATATTATT AGTGGATTTT
ATCAACCAAG AAACCGCTGC TGGTGTGCCC TTCGAGCGCG CAGTAATCCA CTCAGGTGCA
GTGCGTGCTA AACCAATTAT GCTTACCGCA CTTGCTGCCA TGATTGGCGC CCTGTTTATT
CTGGATGATC CGATTTTCAA TGGGCTTGCG ATCAGTCTAA TTTTCGGGAT TTTTATCTCG
ACATTATTAA CCTTAATCGT CATCCCAGTG TTTTACTACT CAGCAATGAA AAATCGCATA
AACTTAACTC AAACAATCGA TTAA
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| Protein sequence | MKHATESPMT LGISGRIAAA FQNSAITPLL ALLGLLLGLF AILVTPKEEE PQIDVTFADV
FIPFPGATPT EVENLVTLPA EQVISEIKGI DTLYSFSQPD GAMIIVIFEV GVSRNDAIVS
LYNQIYSNMD KLPQGAGVGE PLIKPRGIDD VPIVSLTLWS KDRGSKDQQV SAEQLTHVAL
GLETEIKRIP GTREIYTVGQ HEMVANVRID PAKMNSFNLT YDKLRQSLND NNHISMPASL
VQGNQEIKVQ AGQFLQSIDD VKQLVVSISQ DKQGKPIPVY LADIADISLK SDIPSQSVWH
SDKTDIYPAV TIAIGKQPGQ NAVDIADAVL ARIAKVDNVL IPNNVEVTVS RNYGETAADK
SNTLILKLIF ATTAVVVLVF LTMGARESLV VGVAIIITLA ITLFASWAWG FTLNRVSLFA
LIFSIGILVD DAIVVVENIH RHMALGRKSF SELIPVAVDE VGGPTILATF TVIAALLPMA
FVSGLMGPYM SPIPINASMG MLISLVVAFV VTPWLSRKLL KHHDASSTDK SHHQEAGANE
TENKMIRLFT RLIGPFLQDK GGRKARIGLA AGIFVLIGIA VALPVAQLVV LKMLPFDNKS
EFQVMVDMPE GTPVEQTQRV LQELSRYLAT VPEVEHLQLY AGTNAPMNFN GLVRHYFLRN
SQELGDIQVN LVDKKHRKRD SHSIAISVRE ELQQIGAPYQ ANIKVVEVPP GPPVWSPIVA
EVYGPSPAIR EQAAYEMQSL FRETKDVVDI DIFLPAAQQK WQVMIDRSKA SLMAVPYSNI
VDLIATSVGG KDVSYLHIAQ QKQPAPIRLQ LQEGAKIDLE QVLNMKLQSQ TGQSVPVSEL
VTIKRGNIDA PIIHKNMVPM IMVVADMAGP LDSPLYGMFD MASKIDGEGG LGFDQHYIHQ
PTGLDSVAVL WDGEWKITYE TFRDMGIAYG VGMIAIYLLV VAQFRSYLVP LIIMAPIPLT
VIGVMPGHAL LGAQFTATSM IGMIALAGII VRNSILLVDF INQETAAGVP FERAVIHSGA
VRAKPIMLTA LAAMIGALFI LDDPIFNGLA ISLIFGIFIS TLLTLIVIPV FYYSAMKNRI
NLTQTID
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