Gene SO_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2867 
Symbol 
ID1170560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2989986 
End bp2991071 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content46% 
IMG OID637344686 
Productpermease PerM, putative 
Protein accessionNP_718439 
Protein GI24374396 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGTT TTTTTTCTCG TTGGTATCAA GAGCGGTTTA GTGATCCTCA GGCCGTGACC 
TTATTGGCTA TTTTGGTGGG GTTAGCGCTA GTGCTTTATT TTGCTGGCGG CTTATTAGCG 
CCACTGCTCG TCGCCCTCGT GTTGGCTTTT TTACTCGAAT GGCCAGTAGC GCAAATGCTG 
AAATTGGGAA TTAACCGCAC AACTGCGGCT TCCTTAGTGC TAATTATTTT TTTAGGAATA 
GTCGTGCTGC TCACCTTTGG GCTTATCCCC AGTGTGTGGC GTCAAGGGGT GAGCCTGATG 
ACAGATTTGC CGAGTATGAT CGATAAAGGA TTGCAAACTG TGCAGGGATT AGCGACCCAA 
TATCCGCAGT TTATCAGTGT CGAGCAGCTC AATTTAATGG TCGCCGAACT CAAAAAACTG 
CTCGACACCC AACATGTGCT CGATATTGCG AAACAACTGA TTGGATACTC TGCGTCGTTA 
CTGGTGCTGA TGGTGTACGC GATTTTAGTG CCATTGTTGG TGTTCTTTTT TCTTAAGGAT 
AAAGATCAAC TTATCAGTGG CAGTAAACGT TTTTTCCCCA CTAATCGACA GTTAGCACGC 
AAAGTGTGGT TTGAAATGCA CCAGCAAATC TTTAACTATA TTCGTGGCAA AGTGATCGAA 
ATCGTCATAG TTGGTGTCGC GAGCTATATC TTGTTTGCGT TTATGGGACT GAGCTATTCG 
GCCTTGTTAG GGGTGTTAAC GGGACTGTCG GTGTTAATTC CTTATGTGGG CGCGACGTTA 
GTGACTTTGC CCATCATGCT GGTGGCGTTT TTCCAATGGG GTTTCAGCTC GGAGTTTGGT 
TATTTAATGC TAGGTTACGG CATTATTCAG GCCTTGGACG GTAACGTGCT TGTGCCTATC 
CTGTTTTCCG ATGCGGTGGA TTTGCATCCG GTGATCATTA TTGCTGCCGT GTTGGTCTTT 
GGCGGTTTAT GGGGTGTTTT GGGGGTCTTT TTTGCGATCC CATTAGCGTC TCTAGTTAAA 
GCCGTGATCA ATGCTTGGCC GAAAACCGAG ATTGAGCCTA GTGCTTCCGC TCCCCCACAA 
AAATAA
 
Protein sequence
MFSFFSRWYQ ERFSDPQAVT LLAILVGLAL VLYFAGGLLA PLLVALVLAF LLEWPVAQML 
KLGINRTTAA SLVLIIFLGI VVLLTFGLIP SVWRQGVSLM TDLPSMIDKG LQTVQGLATQ 
YPQFISVEQL NLMVAELKKL LDTQHVLDIA KQLIGYSASL LVLMVYAILV PLLVFFFLKD 
KDQLISGSKR FFPTNRQLAR KVWFEMHQQI FNYIRGKVIE IVIVGVASYI LFAFMGLSYS 
ALLGVLTGLS VLIPYVGATL VTLPIMLVAF FQWGFSSEFG YLMLGYGIIQ ALDGNVLVPI 
LFSDAVDLHP VIIIAAVLVF GGLWGVLGVF FAIPLASLVK AVINAWPKTE IEPSASAPPQ 
K