Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2857 |
Symbol | |
ID | 1170552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2981528 |
End bp | 2983264 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344678 |
Product | sodium/solute symporter family protein |
Protein accession | NP_718429 |
Protein GI | 24374386 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGTAC AAGGATTAAC TTATCTGATT GTGGGGCTGT CGTTTGCCCT CTACATTGGG ATTGCGCTCT GGACTCGCGC AGGTTCAACT AAAGAGTTTT ATGTGGCTGG TGGTGGTGTT CACCCAGTCG TTAACGGTAT GGCGACTGCG GCAGACTGGA TGTCAGCGGC ATCTTTTATT TCGTTGGCGG GCATTGTCTC CTTCGTGGGG TATGACGGCA GTGTTTACCT GATGGGCTGG ACAGGTGGCT ATGTTTTGTT GGCCCTGTGT ATGGCGCCAT ATTTACGTAA ATTTGGTAAG TTTACCGTGC CAGACTTCTT GGGTGAGCGT TATTACTCTC AAGCGGCGCG AACGGTAGCT GTTATCTGTG CGATCTTCAT CTGCTTTACC TATATCGCGG GGCAAATGCG TGGCGTGGGC GTGGTGTTTT CACGCTTCCT CGAAGTTGAG GTTGATACTG GCGTGTACAT CGGTATGGCC GTGGTGTTCT TTTACTCGGT ACTCGGTGGT ATGAAGGGCA TTACCTATAC TCAGGTTGCC CAATACTGCG TGCTGATCTT CGCCTTTATG GTGCCTGCAA TTTTCCTCTC TGTGATGATG ACTGGCCATA TCATTCCTCA AATCGGTTTC GGGGCTCAAT TACTCGATGC TGCGGGGAAT AACTCTGGCG TTTATCTGTT AGATAAACTG AATAACCTGT CTGTTGATTT AGGCTTTGCA CCTTATACCG ATGGCTCTAA GAGCATGATT GACGTGCTTT GTATTACCGG CGCTTTAATG GTTGGTACTG CGGGTTTACC TCACGTTATC GTGCGTTTCT TCACTGTACC TAAAGTGAAA GATGCTCGTG TATCAGCAGG TTGGGCACTG GTATTTATCG CCATCATGTA TACAACTGTA CCTGCATTGG CGGCATTCTC CCGTGTGAAT ATGATTGAAA CCATTAACGG TCCAGATCAA AAAGGGGTTG CCTATGAAAC GGCACCTAAT TGGATCAAAA ACTGGGAAAA AACCGGTCTG ATCAAATGGG ATGATAAAAA TGGTGACGGC AAAATCTACT ATGCCACAGG CAAAATAGAA GATGCTGCTA GCACAAACGA AATGAAGATT GACAACGATA TTATCGTGTT AGCTACGCCA GAAATCGCAA ATCTGCCAGC TTGGGTTATC GCTTTAGTGG CTGCAGGTGG CCTTGCGGCG GCATTATCGA CTTCTGCGGG TCTGTTGTTG GTTATCTCAA CATCTGTCTC CCATGACTTA CTGAAAAAGA ACTTGATGCC GAATATTTCT GACAAGAAAG AGCTGATGTA TGCCAGACTT GCAGCGGGTA TTGGTATCGT GATTGCGGGT TATTTTGGCG TTAACCCTCC AGGATTCGTC GCGGCGGTAG TGGCATTCGC TTTCGGTCTG GCGGCATCAT CTCTGTTCCC TGCGATCATC ATGGGTATCT TCTCTAAGAC CATGAATAAA GAAGGGGCTA TTGCCGGTAT GATCCTTGGA TTATTCTTCA CCTCAGGTTA TATCGTTTAC TTCAAGTTTA TCGATCCAAC GGCAAACGTG CCTGCAAACT GGTTCCTCGG TATTTCGCCT GAAGGCATTG GTATGGTGGG GATGGTCATT AACTTTGTGG TTGCTGCAAT TGTGAGTAAA GTGACTGCTG CAACACCTGT ACACGTTCAA GAAATGGTTG AGTCCATCCG TTTCCCGAAA GGTGCTGGTG AGGCCAGCGA CCACTAA
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Protein sequence | MGVQGLTYLI VGLSFALYIG IALWTRAGST KEFYVAGGGV HPVVNGMATA ADWMSAASFI SLAGIVSFVG YDGSVYLMGW TGGYVLLALC MAPYLRKFGK FTVPDFLGER YYSQAARTVA VICAIFICFT YIAGQMRGVG VVFSRFLEVE VDTGVYIGMA VVFFYSVLGG MKGITYTQVA QYCVLIFAFM VPAIFLSVMM TGHIIPQIGF GAQLLDAAGN NSGVYLLDKL NNLSVDLGFA PYTDGSKSMI DVLCITGALM VGTAGLPHVI VRFFTVPKVK DARVSAGWAL VFIAIMYTTV PALAAFSRVN MIETINGPDQ KGVAYETAPN WIKNWEKTGL IKWDDKNGDG KIYYATGKIE DAASTNEMKI DNDIIVLATP EIANLPAWVI ALVAAGGLAA ALSTSAGLLL VISTSVSHDL LKKNLMPNIS DKKELMYARL AAGIGIVIAG YFGVNPPGFV AAVVAFAFGL AASSLFPAII MGIFSKTMNK EGAIAGMILG LFFTSGYIVY FKFIDPTANV PANWFLGISP EGIGMVGMVI NFVVAAIVSK VTAATPVHVQ EMVESIRFPK GAGEASDH
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