Gene SO_2717 details

Gene Information

• Locus tag: SO_2717
• ID: 1170416
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2835165
• End bp: 2835845
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637344540
• Product: cyclic nucleotide binding protein, putative
• Protein accession: NP_718301
• Protein GI: 24374258
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCTAA AACCGTTAGC CAAAGGACGT TATAGCCAGC GATGGGAGCA AGACTATCCC 
CTTATTGAAG CGGTGATACT CAGCTGTATC AGCGAAGTTA AAATGCTTAA AAAAGGCACT 
CACCTCATGA CACAAGGTGA AGCCATAACC TCATTGGTGT TGGTAAAACA AGGGCGCGTA 
TCACTTGGCC ATACCGCCAA AAATGGCCGA TGCTTTCAAT TAGGGACTAT CGATTGTGAT 
TCGCAACTTT TTGGTGAAAT GGAGTTTTTT ACTCAGTATC ACTGTCAGTT GGATATTATT 
GCCAATGAGC CCTTAGAAAT TATGGTCATT AGCGCCGAAA AACTGCAGCA CTCCCTTGGG 
CAACATCCGC AGCTAGCGTT ATTTTTCGCC AGTGCTATTG CCATTGACTA CCAAGACACC 
GTCGATATTT TTACCCGGCG ACTGTTGTAT CCCATCAGCT ATAACGTGGC ATACGATATT 
TACCATGAAT ATTTAAATGA TTTACCTGTC GATGGCTTTA GTAAACGCTA TTTAGAGGCG 
GAGCGATTTG GTACAACCGA TCGCGTCTAC CGAAGAGCAC TACAACTGCT TGAAGAACTT 
GGCCTGATTG AACGAAACAA AGAAGGGATT AGGATTAAAG ATCTCAATGC CCTTAAACAA 
TTTGTTGAAG CTGCGATATA A 

 

Protein sequence

MQLKPLAKGR YSQRWEQDYP LIEAVILSCI SEVKMLKKGT HLMTQGEAIT SLVLVKQGRV 
SLGHTAKNGR CFQLGTIDCD SQLFGEMEFF TQYHCQLDII ANEPLEIMVI SAEKLQHSLG 
QHPQLALFFA SAIAIDYQDT VDIFTRRLLY PISYNVAYDI YHEYLNDLPV DGFSKRYLEA 
ERFGTTDRVY RRALQLLEEL GLIERNKEGI RIKDLNALKQ FVEAAI