Gene SO_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2439 
Symbol 
ID1170152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2551440 
End bp2553590 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content49% 
IMG OID637344270 
ProductsrpA-related protein 
Protein accessionNP_718029 
Protein GI24373986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTC AATCTGCTTA TGCTTCCGGT CTGCAAGGCT TACAATCGGC TCAATCTGGG 
CTAACGCAGG CAACGATTGA TGTGGCTAAA CCTAGCCCAG CGCAAAGCGC GGCACCGACA 
GAAACTGCTA AGGCGGTAGA TGAACCCGAT AAAACCTCGG CGTTACTGTC AGCAAACGAA 
TCATTGAGAC AAGGAGAAGC GTCGAGCGAA GTGCTCGAAC GTGGATCTGA GACCATAGGT 
TCGATTATTA ATATCAAGGT GTAA
 
Protein sequence
MSVMALSSQV VAPSSSFVGA DKSLQLNSGA KPQIGQTYQG GDGKAVTMFA AQTVGLNAPK 
LEANGALEPS LNSLSAVINQ TIPAGAVKPS IPLLNGGKLP RLSPISTDSG LAQTATMEFD 
TSLSSSVQRY SNNASFNLLT GPRSIAGMRE GQIAALPTTS TQGTAILSAS DVSLTALAGV 
NSTIADSIMF GSSIGTTIGS PTGLTNSFPA SSMGDILPSF VTPSVAVGTS STNNGSSSVM 
SPFAADMTAS GGTGINSTVK TVNDATGSIS TSSSSSTTET ISPDSGEQSN LKQQFNAIFG 
QSETINGQTD TESTSAAQTK DQQVKDEQTQ QEREKVAQEQ KQKQQALAAI FAKETQQSPA 
QQSQEETKTR EQELAKEHIK QAQEKAIEQH KAQVEALKSR DSEVKAHEHA HATVGGQYAQ 
SPSFKYEKGA DGQRYATDGE VQIDVSIIPG DPIATINKMK QVYAAAMAPV DPSSADIRVA 
AEALKKMNEA RTKLAEERQQ QIVDQQTTET LIGAEAQIEG LPPLKERQIQ VTGEVDAQGN 
IAAPQDEPSS PVTDVIDKIK QAITAQIASS KTSDAINGTE VDTTDTIEPP TATLAIDLPQ 
AAEDNSAQSS TNTLALLAAS TSYNQDLLQT GRSAMRFYGS VALANLTNND GVNVSQSGIN 
TQVAGAITYS EDKENQSNSV QSSRLTLESL HSLDTRGLFN AQTLALHRPR FLDVNV