Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2228 |
Symbol | |
ID | 1169964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2345116 |
End bp | 2345532 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344082 |
Product | CBS domain-containing protein |
Protein accession | NP_717825 |
Protein GI | 24373782 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAA TTAAAATTCG CGACCATATG GACCGTCAGC CCGTGCTGCT GCGCGCCAAT ATGTCACTGG CGACGGCAGT TGAAAAACTG TTAGACAATA ACAAGATGGG GGCTGCGGTG GTGGATGATA GTGGCAATTT GGTGGGATTT TTATCCCAGC AAGACTGCTT AGCTGTCATG TTAAAGAGCA GCTATCACTG TGACTTGACC TCAGTGGTGA AGGATTGTAT GCGTACTGAA GTGCTGTATG TCGGTCCTGA TGAGAGTATT TTACAACTCG CGGAGCAGAT GCTGGGCGCT AAGCCAAAGA TCTATCCTGT GGTGGATAAT GGCAAAGTCA TCGGCACAAT CAATCGTACC AATGTGTTAA GAGCAATGAA TGTGTACATG CAGCAATGTT ATCTTGCGCC CGCTTAA
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Protein sequence | MDSIKIRDHM DRQPVLLRAN MSLATAVEKL LDNNKMGAAV VDDSGNLVGF LSQQDCLAVM LKSSYHCDLT SVVKDCMRTE VLYVGPDESI LQLAEQMLGA KPKIYPVVDN GKVIGTINRT NVLRAMNVYM QQCYLAPA
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