Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2202 |
Symbol | |
ID | 1169939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2316537 |
End bp | 2317397 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344058 |
Product | LysR family transcriptional regulator |
Protein accession | NP_717800 |
Protein GI | 24373757 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACCG ATTTACTAAA GACTTTTCTC GAAGTCTCTC GTACCCGCCA TTTTGGTCAG GCGGCAGAAA ATCTCTACCT TACCCGTAGT GCGGTCAGTT TTAGAGTGAA ACAACTCGAA AGTATTCTTG GTGTTGCCCT GTTTGAGCGC CAACGAAACA ATATTCAGCC GACTCCAGCG GGAGAGCGAA TGTTAGGCCA TGCGGAGGCG GTATTAACGG CATGGGAGCG TGCTAAACAG GATGTATCTC TTAGTCAGTT ACAATCGACT CAATTAGCCA TTGGTGCGGG TCCCAATATT TGGGATGCCT ATTTACAGGG GTATTTACAA CATCTGCATG TTGGGCTTCC TGGGATTGCA CTGCGCACTG AGGTATTGCC CCTCACTGTG ATGACGCGGC AATTGATGGA TCGAACTCTC GATTTGGCCA TATCCTTTGA TCCACCCAAA CTTGATCAAT TTGAATTAAT ACAATTAGGT CAAATCAATT TGCTGTTGGT GTCTAAATCG ATGGATATGG CGGTGAATGC GGTGCAAGCG GGGCAATACG TCAAAGTCGA TTGGGGCACT GCCTTTAACA TTATTCATGC GCAGGATTAT GCGGCGCTAC CGGTGCCGAC ATTGCATACC AGTTCGGCAC GTATCGCTTT GGATTTTATT TTAAACAACG GCGGCTGCGC CTTTTTACCC GAGCATTTGG TGCAGCCATT GCTAAGCAAG GGTGAGCTGC ATTTAGTCGC AGGGGCGAAT GCGATTTCAC GCAGCGTATA TGTAGCCTAT TGGGCTGAAA ACGATAGATT GGAACACATT AAACAGGCGA TCGGATTCTT AGCCGATAAG CCGTTAACTG AAGTCGATTA A
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Protein sequence | MDTDLLKTFL EVSRTRHFGQ AAENLYLTRS AVSFRVKQLE SILGVALFER QRNNIQPTPA GERMLGHAEA VLTAWERAKQ DVSLSQLQST QLAIGAGPNI WDAYLQGYLQ HLHVGLPGIA LRTEVLPLTV MTRQLMDRTL DLAISFDPPK LDQFELIQLG QINLLLVSKS MDMAVNAVQA GQYVKVDWGT AFNIIHAQDY AALPVPTLHT SSARIALDFI LNNGGCAFLP EHLVQPLLSK GELHLVAGAN AISRSVYVAY WAENDRLEHI KQAIGFLADK PLTEVD
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