| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2127 |
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| Symbol | |
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| ID | 1169870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2232563 |
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| End bp | 2234197 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637343992 |
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| Product | response regulator |
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| Protein accession | NP_717730 |
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| Protein GI | 24373687 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTTG AAGAATCGTT AGAACAATTA AAACGTCAGT ACTTACATGC CTTGCCAGAT
AAAAAGAAAC AAATCATTAC CTTGTGGGTC TCTCTGCGGA AAAACTGGCA AAGCTATATG
CTGTCAGCTG TTTATCGGGA GGTACACAAT TTAAAAGGTT CCAGTGAAAC CTTTGGCTTG
ACTGAGACCA AAGATATCGT CGATAAACTG GAGCTGCAGC TAAAAAACTT ACTGGATGCT
CCCGCACCAA CCCTAAACCT GATTAAGGGC TTAGATACGC TGTTCCATCA GTTACTCCAA
AATAATCAAC ACTATTTGCC AGCGGCCCCC GTGGTTGAAG CGCAAATGCA ACAAAATCCC
TACAACCCCT CAAAGGCTCG CCACGAATAC TGTATTGCCA TTATCGAAGA TGACAACAAT
GTCGGGGCAA TGATCACGAA ACAGCTACAC GAGTTTGGCT TTAATGTGCA ACATTTCTTA
AATTTTACCG ATTTTATCAA GGTGCAATAT GCCAGCCCAT TCGACTTAAT TTTATTAGAT
CTTATCTTGC CCGATTATAC TGAAGATGCG TTATTTGAAG CGGCCTGCGA ATTTGAGAAA
AACAATACTC GAGTATTTGT ACTGTCTTCC CGTAGCGATT TTGATATGCG TTTACTGGCC
ATTCGCGCCA ATGTCAGTGA ATATTTTGTC AAACCTGCAG AAACGACCCT ATTGGTCCGT
AAAATTCATC AATGGCTTAA AATGTCCGAT AAGCCTCCCC TTAAAGTACT GTTAGTCGAT
GATCAACAAT CTATGGTGGA CTATTTTTCG AGCTTGTTAC GTAGCCATGG CTTAATGGTC
AGAGGCATGA CAAAACCCGA GCAAGTCATA CCTACCCTTG AGCAATTTGA ACCAGATTTA
TTTATCTTTG ACCTCTATAT GCCGGGGGTG AATGGGTTAG AACTGGCAAG AATGATCCGT
CAGCTTGATA AATATACTTC AAGCCCTATT TTGGTGTTGA GCTCCGATGA CACCATGCAG
AATAAAGTCA GCATTATTCA GGCGGGTTCT GATGATCTTA TTTCGAAACA AACAGCACCC
AGTTTATTTG TCACCCAAGT GATTTCCCGC GCGCAACGTG GCCATGATAT TCGCAGTTCC
GCCAGCCGAG ACAGTTTAAC GGGCTTGTTA AATCACACTC AAATTCTGGT TGCTGCTCGT
CATTGTATTA ATTTAGCTAA GCGAGCGAAT TCTAGTGTGT GCATTGCAAT GCTTGACTTA
GATCACTTTA AACAAGTGAA TGATACTTAT GGACACTCCG GAGGTGACAA AGTCCTATTA
GCCTTTGCGC ACCTGTTACA ACAGTCCCTA CGCGCTGCCG ATTTTATGGG ACGTTATGGT
GGAGAAGAAT TTATGCTGGT GATACCAGAT ATGCCCGCAC CACTGGTCAT TGCCAAAGTG
AATGCGATTC GCGAGAGCTT TAGTAATATT GTGTTTGTTG AAGAAGGTGC TGAATTTAAA
GTCACATTGA GTGGAGGTTT GGCATTTTCA ACCGAATGTC ATGAATTCCA AGAGTGTTTA
TTATTGGCAG ATAAAAATCT GTATGAAGCC AAACGAACTG GACGAAACCG CATAATCAAT
ACCTTAGTCA AATAG
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| Protein sequence | MSLEESLEQL KRQYLHALPD KKKQIITLWV SLRKNWQSYM LSAVYREVHN LKGSSETFGL
TETKDIVDKL ELQLKNLLDA PAPTLNLIKG LDTLFHQLLQ NNQHYLPAAP VVEAQMQQNP
YNPSKARHEY CIAIIEDDNN VGAMITKQLH EFGFNVQHFL NFTDFIKVQY ASPFDLILLD
LILPDYTEDA LFEAACEFEK NNTRVFVLSS RSDFDMRLLA IRANVSEYFV KPAETTLLVR
KIHQWLKMSD KPPLKVLLVD DQQSMVDYFS SLLRSHGLMV RGMTKPEQVI PTLEQFEPDL
FIFDLYMPGV NGLELARMIR QLDKYTSSPI LVLSSDDTMQ NKVSIIQAGS DDLISKQTAP
SLFVTQVISR AQRGHDIRSS ASRDSLTGLL NHTQILVAAR HCINLAKRAN SSVCIAMLDL
DHFKQVNDTY GHSGGDKVLL AFAHLLQQSL RAADFMGRYG GEEFMLVIPD MPAPLVIAKV
NAIRESFSNI VFVEEGAEFK VTLSGGLAFS TECHEFQECL LLADKNLYEA KRTGRNRIIN
TLVK
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