| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1872 |
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| Symbol | |
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| ID | 1169639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1965423 |
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| End bp | 1969691 |
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| Gene Length | 4269 bp |
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| Protein Length | 1422 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343763 |
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| Product | putative lipoprotein |
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| Protein accession | NP_717480 |
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| Protein GI | 24373437 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA AGTACTCCTC CTATCCGATG TTTTTTATTG CGTTAATAAG TTTACTGTTA
ATCGGTTGTA GTGGTGATAA TAAAGGCTTT CTAGGCTCCA AACCATCAGA GAGTCATTTA
ACGGCTACAC CACGAGTGTA TGTGCTCAAA CAAGGTGAGA TCCAGCATGT GGATTTAACT
CAATTGGTCA GCACACAAAA TGTGGCAAGT TGGGAGTTGA CTGATTTAGA TGATAAAAGT
GGTCTTGGTG TTATTGTCCA TCACGATAAA ACTTCTTTTG ATTATAAAGC GCTAACAGCG
GGAGCGGGCT TTATTAATTA CACGGTAAGC GGGCAACATC TCTCTGTGTC GTCGCAGATT
ATTTTTGCGG TCAATGCAGG TGAAACGCCT AATAACCATG TGCCTGTAGC TAGCAATATC
AATGTAGAAA CGCTTAATAA TCAAAGTATC AGCATTGATT TACGTGACAG TATCAGTGAT
GAAGATGGCG ATACGCTTCG GATCAATAAC TTGATTTCTG CGTCAGGGCG CTTCACCTTA
GATGGCCACC AGGTGACTTT CACTCCTGAT GGATTTGTAG GCGTCGACCA AGCGGTATAT
AGCATTGACG ATGGGCGTGG CGCTTATGCA ATGGCCTATA TTGCGGTGAT ATCGAAGGAT
GCAACGCCAT CCATACCCAA TAATGCACCA GTGGCTAAAG ATGATAGCAA AGCAATCGAT
GTGGCAAAGC AGTCAACATT ATCCATCAAT CTCAGCGCGT TAATGAGTGA TGCCGACGGT
GACAGTCTTC ACATTGTGGC GCTCTACAGT GGTAATGATC GCGCCGAGAT TGTTGGCCCT
CAGGAAATAA TGTATACGCC TAGTGCATTT CGCGGAGTAG ACCAATTTAG CTACCTGATT
TCGGATAGTC AGGGAGGATA CGATTTAGGC ACAATTACCG TTCACGTAAC GGATTCAACA
CCACAAGCGC CTGAGAAGCC AAGCCTTGTT GCATACCCAC AAACGTTTAC GCTGGGGCTG
GAACAATCTC AACGGGTAAA TTTAATTCCA TCGGTTGTAA GCAGTAATAT TGATAGCTGG
ACATTAACCC AGGTGCAAGA TAACTCAGGT TTGGGGGTGG TTTCAGATAA AACGGCTTCG
GCCTTTACTT ATTTAGGGCA ATCACCTGGC GTTGCCAATA TTAGCTATAC CGTGCAAGGT
GGCGGATTAA CCGCCACTTC AGAGGTAATG GTTATTATCA ATGCCCCTCC GATACCTGAT
AATACCCCGC CCAATGCCAA TAATGTCATG TTTGACACGG TTAATAATCG TAATGTGAAA
GTTGAATTGC TCAATTACAT CAATGATGAA GATGGTGACA CATTAAACAT CACTCAGCTT
ATTTCTGCAT CAGGTCGTTT CGGTCTCAAC GGCAGCCTAG TCACGTTTGC GCCTAATGGA
TTTGTGGGCG TTGACCAAGC CGTTTACAGC GTTGAAGATG GAAAAGGCGG ATACGCATTA
GGGCACATAG TGGCAACATC AATGGATGCG CATCCGCCTG TCCCCAATAG CCCACCAACG
GCGAAGGATT TAGATAAAAC GATTGATGTC GCGACATTAC CCGTCTGGGA TATTGATTTA
TCGGCACTTA ACCTGATTGC GGATGCCGAT GGTGATGCGC TAAAGATAGT GAATGTTTAC
AGCACGGATA ATCGTGCGGT TAAGCAAGCT GACACTCGTA TTTCCTACAC GCCAGGCGCT
TTTCGTGGGG TAGACCAGTT TACCTATGTG ATTACCGATA GTAAGAACGG GTTTGCTACC
GGTGTGGTTA CGGTTGCCGT GAATGACAGC ACGCCAGGCA ACACCATTCC AACAGCAGAG
GCAGTTGAAG GTCACATGTT GGACAATGAC CCGATGATAA CCCTGTCCGT TGCAGATAAA
GTACATGATG CCGATGGTGA TGCACTAAAG ATTGTGAATA TTACCGGTGC CTTGGGCAAG
GCCACTGTCA ACCCCGCCAA TTCCTTAGAG ATATTATACG AGCCAAACGG TTTTGTTGGC
GTTGATAGTT TTGTGTATAT GGTGAGTGAT GACCAGGGCG GCTATGCCAT GGCAGCAGTA
ACAATTAAGG TCACCCATCA TAATCCAACC GCGCCAATTG CAGGGGTGAT AACGGCTGAA
ACCTTGCTCG ATACGCCAGT CTCGATTGAT TTGTCGACAG TGATTTCGGA TAACGAAACC
CCGACTCCCG ATTTAGTCAT CACGACTGTT AGTGCTGCGA CATCACCAGC TACCGCAACC
TTAAGTGGTC AACTGGTCAC TTATACGCCA AAGGGTTTTA CAGGAGTCGA CGTTTTAACC
TACGAAGTGT CCGATGGACT GCATACTACC AAAGGGACTA TCGTTGTAAC GGTAACACCG
TATGGCGCCC ATGATATTAC GGCGGCTGAT GTGTTTTTAA CAACGCCAGC CGGTATCGCA
GTTTCTATTG ATATGACCGA TAAGATAAGT TCAACGATAC CCTCCGCGGG ACCATTCAGT
GTCGAATATG TGCTGGGTAA TACGCTTGGT GATGTAACGA TTACAGACAA TACGCTGACC
TACACGCCAA AGCTGGGGAC TTATGGTCAA GACGTGTTTA TTTATAACGT TAAAGACAGT
CATGACCCAG CGCATTATGC ACAAGGCTCC ATTACCGTTG ATATTACGCC GCCACCGGTG
CCTGTGATAA CAAAGCTTGA CGCCACCTTA GAAACGGGTG GGCGATTAAA AGCGAACGTC
GAGTGTGAAC GCTGTGATGT GACTCAATAT CGGTACACAT GGGTCATCAA TGGTTTAACG
GTTGGGACAT CTAACACCTA TGCATTGCAA GCGGCAGATA AAGGCTACAA TATTCGGCTC
GATGTACAAG GCAAGGATAT CTATGGTCAG GTTAGCGGTA TTGAGTATGC CACTTATGCT
TATAATGCAG TGAAAGCCAT TTATTCAAAC TATTTTGCCT TTGCCGCCCT GAAAGATGAT
GGCTCGGTAG TCACTTGGGG GGATAGCGGT TATGGCGGTG ACAGCAGCGC AATCACCCAT
AAGTTAAGCT CAGGAGTGAA CACTATTTAT TCAACCCCTT ATGCCTTTGC CGCTCTGAAA
GATGATGGCT CGGTGGTTAC TTGGGGGGAT AGCGGTTATG GCGGTGACAG CAGTGCAACC
ATCGATAAGT TAAGCTCAGG GGTGAACACC ATTTATTCAA CTAATTATGC CTTTGCTGCA
GTCAAAAACG ATGGTTCAGT GGTTACTTGG GGAGATGACG ATGCTGGTGG GGACAGCAGG
ACTGTCGCTG ATAAGTTAAC CTCAGGGGTA AAAACCATTT ATTCAACCAC AGGTGCCTTT
GCGGCACTTA AAAACAATGG TTCGGTAATT ACTTGGGGGG ACCACACTGG CGGTAGCAGT
AGCGCCGTCA CTAGCCAATT AAGCGCTGGG GTGAAAGCTA TTTATTCTAC TTTTTATGCC
TTTGCAGCCA TAAAAGACAA TGGCTTGGCG TTTACTTGGG GAGGCGGCTC TGGCGGTGAC
TACTGCGGAT GGGGAAGCTC AGGCGGTGAC TACTGCGACG TTGAATCGCA GTTAACCTCT
GAAGTGAAGG CTATTTATAC AACTCAAAAT GCCTTTGCGG CCGTAAAAAA CAATGGCTCG
GTTGTCACCT GGGGTAGCGA GTTCTCTGGC GGTAATAGTA GCGCTGTCGG GGGGCGATTA
AGCTCTGGAG TGGAAACTAT TTATTCAAAT ATACAGGCCT TTGCGGCCGT AAAAAATGAT
GGCTCAGTGG TTACCTGGGG GGATGCGATC ACTGGCGGCG ACAGCAGTGC CGTCTCGGGC
CAATTAAGCG CTGGGGTGAA AGCTATTTAT TCAACTAATG CTGCCTTCGC TGCTTTTAAA
ACTGATGGTT CAGTGGTCAC CTGGGGAGGA TGGGGAGACG GTAATGGCGG TGACAGCAGT
GCTGTCGCAG AGCAGTTAAC CTCTGGAGTA AAGGCGATTT ATTCAACGGT TAGTGCCTTT
GCGGCCATAA AAGATGATAG CTCGGTGGTG ACTTGGGGAG GCGTGTTCTG GGGAGGTGAC
AGCAGCGAAG TCGCAGGCCA GTTAACCTCT GGAGTGAAGG CTATTTATTC AACTGATAGT
GCTTTTGCAG CCGTTAAAGA TGATGGCTTA GTGGTTACCT GGGGAAGTGA TAACAATGGC
GGTAACAGCA GCTCGGTAGC ATCGCAACTC GCTCCGTCAA TAACATTAAT TAAAACCTCA
ATAGACTAA
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| Protein sequence | MIKKYSSYPM FFIALISLLL IGCSGDNKGF LGSKPSESHL TATPRVYVLK QGEIQHVDLT
QLVSTQNVAS WELTDLDDKS GLGVIVHHDK TSFDYKALTA GAGFINYTVS GQHLSVSSQI
IFAVNAGETP NNHVPVASNI NVETLNNQSI SIDLRDSISD EDGDTLRINN LISASGRFTL
DGHQVTFTPD GFVGVDQAVY SIDDGRGAYA MAYIAVISKD ATPSIPNNAP VAKDDSKAID
VAKQSTLSIN LSALMSDADG DSLHIVALYS GNDRAEIVGP QEIMYTPSAF RGVDQFSYLI
SDSQGGYDLG TITVHVTDST PQAPEKPSLV AYPQTFTLGL EQSQRVNLIP SVVSSNIDSW
TLTQVQDNSG LGVVSDKTAS AFTYLGQSPG VANISYTVQG GGLTATSEVM VIINAPPIPD
NTPPNANNVM FDTVNNRNVK VELLNYINDE DGDTLNITQL ISASGRFGLN GSLVTFAPNG
FVGVDQAVYS VEDGKGGYAL GHIVATSMDA HPPVPNSPPT AKDLDKTIDV ATLPVWDIDL
SALNLIADAD GDALKIVNVY STDNRAVKQA DTRISYTPGA FRGVDQFTYV ITDSKNGFAT
GVVTVAVNDS TPGNTIPTAE AVEGHMLDND PMITLSVADK VHDADGDALK IVNITGALGK
ATVNPANSLE ILYEPNGFVG VDSFVYMVSD DQGGYAMAAV TIKVTHHNPT APIAGVITAE
TLLDTPVSID LSTVISDNET PTPDLVITTV SAATSPATAT LSGQLVTYTP KGFTGVDVLT
YEVSDGLHTT KGTIVVTVTP YGAHDITAAD VFLTTPAGIA VSIDMTDKIS STIPSAGPFS
VEYVLGNTLG DVTITDNTLT YTPKLGTYGQ DVFIYNVKDS HDPAHYAQGS ITVDITPPPV
PVITKLDATL ETGGRLKANV ECERCDVTQY RYTWVINGLT VGTSNTYALQ AADKGYNIRL
DVQGKDIYGQ VSGIEYATYA YNAVKAIYSN YFAFAALKDD GSVVTWGDSG YGGDSSAITH
KLSSGVNTIY STPYAFAALK DDGSVVTWGD SGYGGDSSAT IDKLSSGVNT IYSTNYAFAA
VKNDGSVVTW GDDDAGGDSR TVADKLTSGV KTIYSTTGAF AALKNNGSVI TWGDHTGGSS
SAVTSQLSAG VKAIYSTFYA FAAIKDNGLA FTWGGGSGGD YCGWGSSGGD YCDVESQLTS
EVKAIYTTQN AFAAVKNNGS VVTWGSEFSG GNSSAVGGRL SSGVETIYSN IQAFAAVKND
GSVVTWGDAI TGGDSSAVSG QLSAGVKAIY STNAAFAAFK TDGSVVTWGG WGDGNGGDSS
AVAEQLTSGV KAIYSTVSAF AAIKDDSSVV TWGGVFWGGD SSEVAGQLTS GVKAIYSTDS
AFAAVKDDGL VVTWGSDNNG GNSSSVASQL APSITLIKTS ID
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