Gene SO_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1692 
Symbol 
ID1169482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1779414 
End bp1780319 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content46% 
IMG OID637343596 
Producthypothetical protein 
Protein accessionNP_717303 
Protein GI24373260 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGC CACCCACACA GGCCATAGTG CTTGCGATAC TGGCAGCAAG CTTGATGGGT 
ACCATTGGCG TATTCGCACG TTTTGCCACC ATGCCCGCTG AACATATCAC CTTTTATCGG
CTATTACTGG GTGCGATGTT TTTAACCGCA TATATGCTGT TAACAGGTAA AAGAGACCAG
ATCCGCCATA GGCCCAGTAA ACGCACCTTG ATTAATGGTG CTATGCTCGC GGGATTTATG
GCTTTTTATA TCGAGGCCAT TGAATACACC CAAATGGCAA CCGTGATCAT GATTATCTAC
CTTGCGCCTG TGGTGACGTC ACTCTTTGCC CATTTTGTCT TTAATGAAAG GCTCAACCGA
TTCAGTATCG CCAGTGTGGC CCTTGCCTTA ATGGGCTTTA TCTTAATGCT GCCCGTCACC
TCGAGCCAGT CGCTATATCA ATCTGAAATT ATGGGATATT TTTATGCAAT ACTGGCGCTC
ATCACCTATA GTGGCTTTAT CTTAATCAAC CGAAAACCCA GCGCTGTATC ACCCTACCAA
AGCACACTGG TCCAATTAAG TGTTGGCGCA TTATGTTTAC TTCCCTTAAT GTTAACGACG
CCATTAGTAC CAAGCCTTAA TCAGTTGACT TGGTTGCTAG CGATTGGATT TTTGCCGGGA
TTTTTAGCGA TTCTATGTGC AGTAAAAGCC CTAAACCAAC TGCCCTCGGT AACCTATGGC
ACACTATCCT ATGTGGAACC TGTTGTGGTG GTCGTGCTGG CGTGGTGGCT GTTTAATGAA
GCCTTAACTG CACAGCAATT GATGGGGGTG GCGCTGATTA TACTTGCAGG CATAGCTCAG
GGGTGGCAGA GTCAACGTAA AGCGCTAAAA AGTACAAAAG AAACATTGGT TTGCCCTCAT
GACTAA
 
Protein sequence
MTPPPTQAIV LAILAASLMG TIGVFARFAT MPAEHITFYR LLLGAMFLTA YMLLTGKRDQ 
IRHRPSKRTL INGAMLAGFM AFYIEAIEYT QMATVIMIIY LAPVVTSLFA HFVFNERLNR
FSIASVALAL MGFILMLPVT SSQSLYQSEI MGYFYAILAL ITYSGFILIN RKPSAVSPYQ
STLVQLSVGA LCLLPLMLTT PLVPSLNQLT WLLAIGFLPG FLAILCAVKA LNQLPSVTYG
TLSYVEPVVV VVLAWWLFNE ALTAQQLMGV ALIILAGIAQ GWQSQRKALK STKETLVCPH
D