Gene SO_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1519 
Symbol 
ID1169328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1591769 
End bp1593163 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content52% 
IMG OID637343448 
Productiron-sulfur cluster-binding protein 
Protein accessionNP_717136 
Protein GI24373093 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATATC AGCATAATCA CGAGGCAATG GGTTCACAGG TTCACGCCTA TAAGGCCGAT 
ATTTTCTGCC GCGATGAAAC CCGAGTTGAC TGGCACTCGA AAGCCCTTTG GCTATTGAGG
GAAAAACGCG ATCGCGCCGC TGGCAGCTTA CCCGAGTGGG AGCAACTGCG TCAGTTGGGC
TCTGAAATCA AACTGCATAC CTTAACCAAT CTTGCACAAT ACCTTGAAAC CTTTGAGCAA
AATTGCCTTG CCAACGGCAT CAAAGTGCAT TGGGCAAAAG ATGGCGCCGA GCACAACCGC
ATCGTGCACG AGATCTTAGC CAGCCATAAG GTCAAAAAAT TAGTTAAATC TAAATCCATG
CTCACCGAAG AATGTCACCT CAACCCTTAC TTGGAGCAAC GTGGGATTGA AGTGATTGAT
ACCGACTTAG GTGAACGGAT TATTCAGCTC GCGAAAATGC CGCCATCGCA CATTGTGGTC
CCCGCTATCC ACATGAAAAA AGAGGAAGTG GGCGATCTGT TTCATGACAA ATTAGGCACT
AAGGCTGGCG AGTCCGATCC CTTGTATTTA ACCCGTGCCG CCCGTGCCCA TTTGCGTGAG
CAATTCCTCA GCGCCGATGC CGCCATGACA GGGGTAAACA TGGCGATTGC CGATAAGGGC
GCCGTGGTCG TTTGTACCAA CGAAGGTAAC GCCGATATGG GCGCTAACCT GCCCAAATTA
CAGTTGCATT CGATGGGGAT CGACAAAGTT GTCCCCGATA TCGACAGCGC AGCGGTATTG
CTGCGTACCC TCGCGCGCAA TGCGACCGGC CAACCGGTGA CGACCTACAG CGCCTTCTAC
CGTGGCCCAC AGGTCGATGG TGAGATGCAC GTGATTATCG TCGATAATGG CCGCACCGAG
ATGATGAAGG ATAAAATCCT TGCCGAATCA TTAAAATGTA TTCGCTGTGG TGGCTGCCTT
AACACTTGTC CGGTATATCG CCGCTCCGGT GGTTACAGCT ATAACTACAC CATTCCCGGT
CCGATTGGGA TTGCCGTGGG TGCCACCCAT GATAATACCA ACTCCATCGC TTGGGCTTGT
ACTCTGTGTG GCAGCTGCAC CTATGTCTGC CCGACTAAGG TGCCGCTCGA TAAGATTATT
CACCACCATC GACGCCTTAA GGCCGAAGCA GGAAAACTCC CTTATGGCAA AAATGCTTAT
ATGCCATTAG TGGGTAAATT TATGGCTAGC ACGACTCTGC TCAATTGCTC TATGGGCGCG
GCCCGCACCG CACTGCGCAT TCTGCCCGGC AGTCTGCTCA AACCCTTTAG CGGAGCTTGG
GGTAAATACC GTGAGCTGCC CGTCGCCCCC AACTCCAGCT TCGAAGCTTG GTTTAAGAAA
CACAGGAGCC TATAA
 
Protein sequence
MAYQHNHEAM GSQVHAYKAD IFCRDETRVD WHSKALWLLR EKRDRAAGSL PEWEQLRQLG 
SEIKLHTLTN LAQYLETFEQ NCLANGIKVH WAKDGAEHNR IVHEILASHK VKKLVKSKSM
LTEECHLNPY LEQRGIEVID TDLGERIIQL AKMPPSHIVV PAIHMKKEEV GDLFHDKLGT
KAGESDPLYL TRAARAHLRE QFLSADAAMT GVNMAIADKG AVVVCTNEGN ADMGANLPKL
QLHSMGIDKV VPDIDSAAVL LRTLARNATG QPVTTYSAFY RGPQVDGEMH VIIVDNGRTE
MMKDKILAES LKCIRCGGCL NTCPVYRRSG GYSYNYTIPG PIGIAVGATH DNTNSIAWAC
TLCGSCTYVC PTKVPLDKII HHHRRLKAEA GKLPYGKNAY MPLVGKFMAS TTLLNCSMGA
ARTALRILPG SLLKPFSGAW GKYRELPVAP NSSFEAWFKK HRSL