Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1493 |
Symbol | malQ |
ID | 1169304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1557948 |
End bp | 1560257 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343424 |
Product | 4-alpha-glucanotransferase |
Protein accession | NP_717110 |
Protein GI | 24373067 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1640] 4-alpha-glucanotransferase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCTGG AGAAGTTGCT GTATTTGCGG GGCGTAGGAG CAGACTTTAC CGACTGCTTC GGCCAGTACA TTCGCATTCC CGAAGCTGAC AGGCAAGGGA TTTTGACCTG TATGTTACAG GATACTAATG AGCCGCATAA CGAGGCTGAG TTGTCAGCGG TGAATCGGCT CACACAGAGT GCTATCGCAG CCCAAGTTTA TCAATTAGAC GCACAGCATT GGACCCAAGT ATTACCGGCA TTTCATTGGT GTTATGTCGA TGAACCATGG GTGTGCTTAT ATTTACCTCA ATCTTACCGT GGCGATCTGC TGCTGACGTT TAAATGTGAG CAAGGTGAGG TAATTGTCTT TAATGTGCCG TTTTCAGGCT TAAAGCCGAT TGGGGATTAT CGTATTGAGG AATCCGAGTT AGCGCGACAT GGCGATAGCC CATTTGCCGA CGAATGCCAG TTTATTCAAT ATCGTCTCGA TCTTTTAGCG CATGAGTTTG ATTGCTGCGA TGTCTCTGAG CAAGACAAGC TCAGCGATGT GTCCTGCCTT GGGCTGGGTT ACCACAAGCT CAGCGTCAGC TTGGGTGATA CGACTTCTAC TTTAGGGGAT TGTACTTCAG GGATTCATCA TGCCGAGCTA ACAGCAAGGA AGGCGAATGA GTTCTATGGC CACTTTATGC TGGCACCGCG GACGGCTTAT CAAGGCGTGA TGAACAGCGT GGCGCAAAGA AAACGCCATA AACCTTGGGG CGTGAGTGTT CAGCTTTACA GTGTACGCAG TGATAACCAA TGGGGGATCG GCGACTTTGG CGATCTAGAG CAACTCATCA CCTTAGTTGC CGAATATGGC GCTGATTTTA TTCAACTCAA TCCATTACAT GCCTTAGATA TTGCCGTGCC GGAACAGCCT AGTCCTTATA GTCCCTGTGA TCGGCGCCGG CTTAATCCTC TGTATATTCA CTTGTCGAGC GTGCCTGAGT TTGAGCTCTT GGCTGAGGAA TTTGCCGCCA ATGAATGGCA AGAAGCCATT GCACTACTCA ATACTGAAAA TTGGCTCGAT TATCCCAAGG TGAGTGAGCT TAAGTACCGC GCCTTTGCCC GTTTATACAC AGTGTTTTGC GAAAGCCATT TACAGCAACG TACGCTAAGG GCGCAGCGTT TTCATGTTTT TGTCAAACAA GAGGGTGAGT CGCTACGGGA GTTTGCTCAG GCCGAATACT TACGTAGCCC TAGCGCCATT GCGCAGGATG AAAGTTTTTA TCTTTATCTG CAGTTTGTGG CCGAAGAGCA ACTGCAACTG TGCCAGCTTA AGGCAAAAGA AGCGGGCATG GGCATCGGGC TAATTCGCGA TCTTGCAGTG GGTGCAGCCT TACAAGGTGT TGAGGTGCAA GCCAATTCAC AACTGTTTTG TCTAAACGCT AGCATAGGCG CGCCGCCGGA TCCCTTTGCG CCCCAAGGCC AAAATTGGGG CTTAACCCCC CTCGATCCTA TTAAGTTAAA GCAAGATCGC TATCGCCATT TTATTGCGTT AATCCGCGCC AATATGACGT ACTGTGGCGC ACTGCGAATT GACCATGTGA TGGGGCTGTT ACGGCTCTGG TGGTGGCCTC TGGATAAACG TCTTGGGCAG GGCGCCTATG TCTATTACCC CGTTGAAACT TTGCTGGCGA TACTCTGTCT TGAAAGTCAG CGCGCCCGCT GTGTGGTGAT TGGCGAAGAC TTAGGCCTAG TCCCGCCTGA CATTATTCAC CGCCTGTATC ACGCCGGCGT TTACTCCAAC GAACTGTTCT ACTTCTGCAA GGATCATCAA GGCTTTAAGC CGCCGAGCCA ATATAAGTTC CAAAGTTTGA TGATGCTGGC AAACCACGAT GTGCCCACCT TGGTCGCTTG GTGGACGGGC AGTGACTTGC ACCTGAGGCG TCAACTCGAC TTACTCACAA CCGACGAGCA ATTAGGTGAG GCATTGGCTG GACGTGAGCA GGAAAAACAC CAGCTTGTGC ACAGTTTAAT CTCCCAAGGT TTATTGCCTG AGACAGATAT TCAACAGATT GATCTTGAAG ATTTATTAAC CGCGTGGATG GCATTGGGTG CCTCAGGCAA TAGTGCGCTT TACAGCGTGC AATGGTGCGA TCTGCTGGCT GATCGCCATG CGGTCAATAT CCCTGGCACT TGGCTCGAGT ACCCCAATTG GCAGCGACGA TTGCCGATCA CGTTAAGGGA TGCCGCGACC CAAAGCACTG TCGCACTGCG CTTGCAACGC ATTGCTGCTG CGAGACATTT GCCGGAAATC GCTGCACAAA CAGATAACAC CTTTGACTAA
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Protein sequence | MGLEKLLYLR GVGADFTDCF GQYIRIPEAD RQGILTCMLQ DTNEPHNEAE LSAVNRLTQS AIAAQVYQLD AQHWTQVLPA FHWCYVDEPW VCLYLPQSYR GDLLLTFKCE QGEVIVFNVP FSGLKPIGDY RIEESELARH GDSPFADECQ FIQYRLDLLA HEFDCCDVSE QDKLSDVSCL GLGYHKLSVS LGDTTSTLGD CTSGIHHAEL TARKANEFYG HFMLAPRTAY QGVMNSVAQR KRHKPWGVSV QLYSVRSDNQ WGIGDFGDLE QLITLVAEYG ADFIQLNPLH ALDIAVPEQP SPYSPCDRRR LNPLYIHLSS VPEFELLAEE FAANEWQEAI ALLNTENWLD YPKVSELKYR AFARLYTVFC ESHLQQRTLR AQRFHVFVKQ EGESLREFAQ AEYLRSPSAI AQDESFYLYL QFVAEEQLQL CQLKAKEAGM GIGLIRDLAV GAALQGVEVQ ANSQLFCLNA SIGAPPDPFA PQGQNWGLTP LDPIKLKQDR YRHFIALIRA NMTYCGALRI DHVMGLLRLW WWPLDKRLGQ GAYVYYPVET LLAILCLESQ RARCVVIGED LGLVPPDIIH RLYHAGVYSN ELFYFCKDHQ GFKPPSQYKF QSLMMLANHD VPTLVAWWTG SDLHLRRQLD LLTTDEQLGE ALAGREQEKH QLVHSLISQG LLPETDIQQI DLEDLLTAWM ALGASGNSAL YSVQWCDLLA DRHAVNIPGT WLEYPNWQRR LPITLRDAAT QSTVALRLQR IAAARHLPEI AAQTDNTFD
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