Gene SO_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1460 
Symbol 
ID1169275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1518319 
End bp1519659 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content42% 
IMG OID637343396 
Producttype I restriction-modification system, S subunit, putative 
Protein accessionNP_717077 
Protein GI24373035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGAG CTAAAGAGGC GAAAAAAATA ATTGACGACT GCTTATTGCC TAAGAAGGAA 
TTAAAAGACT TTTTAGTAAA TAGAGCTAAA GGTGCTTTTC ATGCAGGGAG AGAAGGCCGA
GTTTGGGTAA AGGAAGAACG TTATGGCGTT CCTTTCATGG GAAGTGTGGA TATTATCCAG
GCTAATTTAG ATAGATTACC TTTGATATCC AAAGAACAAG TAAGTCGCAA ACCATTATTT
AAGGTTTTCA AAGATTGGGT TCTGATCACT AGGTCTGGAA CTATCGGGAG AATGACTTTA
GCTAGACAGG AAATGGATGG TCACGCTTGT TCAGAGCATG TTATGAGAGT CGTTCCTAAT
CCAGAGAAAG TATCCCCTGG ATATCTGTAC TGCTATCTGA GAAGTAAGTT CGGTGTTCCT
CTTGTAGTTA GTTCTACGTA CGGAGCAATT ATTCAGCATA TTGAGCCTCA TCACGTAATT
AATTTGCCTG TCCCAATTGT TGATAAGCAA CTTGAGGAAA AAGCGCATGA GCTAATAAAC
AAGTGTGGTG ATAACCGAAC TGAATCTAAT GCATTATTGA AAAAAGCTGG GCAGCTTATC
AACGAACATT TTAGTTTTCC AAATAAACTC GCCTTATCTC ATCGCATTTT TACTCATTCA
GCAGCTTCAT CGTCGTTAGT TCAAAAACGT ATGGATGCAA CTTATCACGA TCGGGTTGCC
CAGATGAGTG ATGACTTGGT TGAACAGGCT GGCGCAGAGA AAACGTTGGC TGAGTTAGGA
GTGAACACCG GCGAATCAGG TCGAATGAAA CTGGTTTTCA CCGAAAGTGA TCATGGGGTT
CCCTTTACAA CGAGTGGTGA AATTTTTCGG GCCCGTTACG AACCACAACG GTTTTTAGCA
AAATCAAAGT TAGGTGATGT TGCAGATTGG GGTGTACGAC AAGAAGATAT TCTATTGGCT
CGAAGTGGGC AAGTAGGCGG CATTATTGGC ACAGGTGTTT GGGCTGATTC CCGCTTTGAA
AACGCAGCAG TGTCAGTCGA CGTGATAAGA ATTAAAGCTC AAGAATCAGA GGTTTTACCT
GGTTATCTGT ATGCCTATCT TATGTGTACG GATGTCGGTT ACAGACAACT TATTCGGTCA
GCTGCTGGAA GCTCAATCCC ACACTTATCT TCCGACGATG TTTTGAAACT AAAACTTCCT
CGTATGGGGA CTGCGGAAGA AAAAGCAGTA CATGAGCTAG TTCAAAAAGC AGGTGAGCTG
GCTGCAGAAG CACAGAAGCT CGAAGATGAA GCAGTTAAAA TGGTCGAAGA CGCAATAGAA
GCAGCAGCAC CAAAGCATTA A
 
Protein sequence
MTGAKEAKKI IDDCLLPKKE LKDFLVNRAK GAFHAGREGR VWVKEERYGV PFMGSVDIIQ 
ANLDRLPLIS KEQVSRKPLF KVFKDWVLIT RSGTIGRMTL ARQEMDGHAC SEHVMRVVPN
PEKVSPGYLY CYLRSKFGVP LVVSSTYGAI IQHIEPHHVI NLPVPIVDKQ LEEKAHELIN
KCGDNRTESN ALLKKAGQLI NEHFSFPNKL ALSHRIFTHS AASSSLVQKR MDATYHDRVA
QMSDDLVEQA GAEKTLAELG VNTGESGRMK LVFTESDHGV PFTTSGEIFR ARYEPQRFLA
KSKLGDVADW GVRQEDILLA RSGQVGGIIG TGVWADSRFE NAAVSVDVIR IKAQESEVLP
GYLYAYLMCT DVGYRQLIRS AAGSSIPHLS SDDVLKLKLP RMGTAEEKAV HELVQKAGEL
AAEAQKLEDE AVKMVEDAIE AAAPKH