Gene SO_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1392 
Symbol 
ID1169211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1449692 
End bp1450171 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content49% 
IMG OID637343334 
Producthypothetical protein 
Protein accessionNP_717012 
Protein GI24372970 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAA TCAATCCACA GAATCTAAAG ATGGCCTTGC TCGCAGGGTG TGGAGCCATG 
TTGTGTATCA GTAGTTTAGC CGCGCTTGAA CAGCTAACAC CGCAAACCAT TTGGTTAATG
GCTCCCTTTG GCGCCACTAT GGTGTTGCTG TTTGCCTTAC CAGAAAGTCC ACTCGCTCAA
CCGAGAAACA TTCTCTGCGG CCACTTACTC ACGAGTCTGG TAGGACTGAT AATTTTAAAT
ACTTTGGGAG TATCCCCGCT AACCTTAGGG CTTGCGGTCG GATTAGGCAT AGCGGTGATG
ATGCTAACCC ATACAGTACA TCCACCCGCG GGAGCAAATC CTCTGGTTGT TATGCTCACG
GCGCAGCACT GGGATTTTCT GTATATGCCC GTCGCCAGTG GTGTTGCGCT CATTCTCGCT
TTTGGTTGGC TGTATCACAA CTTACTTTGC AGCCGCCAAT ACCCACAAAA GTGGTTTTAA
 
Protein sequence
MQRINPQNLK MALLAGCGAM LCISSLAALE QLTPQTIWLM APFGATMVLL FALPESPLAQ 
PRNILCGHLL TSLVGLIILN TLGVSPLTLG LAVGLGIAVM MLTHTVHPPA GANPLVVMLT
AQHWDFLYMP VASGVALILA FGWLYHNLLC SRQYPQKWF