Gene SO_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1321 
Symbol 
ID1169142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1374935 
End bp1375924 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content48% 
IMG OID637343265 
ProductCobD-related protein 
Protein accessionNP_716941 
Protein GI24372899 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAGCT CTTTTTATCA ACAACTTGTC GAAATTGATG GCGCTTTGTT CGAAGGCTTC 
TTGGTACTTT TCTTTGCTTT ATTACTGGCG CGTTTGGCGC CATTACCCAG GGAAATGCAG 
CCACTGATTT GGTTTAGTCA CTTAGCCAAA CAGCTCGCAG CCAAAGTCAA TCGCCCCGGG 
CGCGCACCCA GCCAACAAGC TACTGCGGGC TTTTTAGCCA TGTTGTTACT GGTATTCCCC 
TTCTGGGCGA TTATTACTTT TTTGCTCGAA CTGGCAGCCT TCCCATGGTT TTTTGAGTTT 
TTAGTGCTGT ATCTGTGTTT GAGTGATGCA GGCTTTAGCC AAGTGGCCGA CGAAATCGCT 
AAAGCATTAA ACCGCGAGGA TAATGCCAGC GCAAAAAAGT TATTACAGCC GTGGGTTGTC 
CGTGATACGG ATAATCTGTC GGAAGTAGGC TTAACCAAAG CGACGATAGA AAAACTGGCT 
ACGGCACCGA TTTACGGCAC GGCGTCGACT ATCTTCTTTT TTGCGATCGC GGGCGCGCCT 
ATGGTGCTGG CGGTCAGAAT GATTAAACAG CTCGAGCTCA GCTGGCCACC CATACAGCCC 
AAATATCAGT ATTTTTGCCG AACAGTGCAC ACGCTCTCGA CCGCGCTGCT GGCAATCCCT 
GCGTGGTTAT GGAGCCTATC AATTGCAATT CAGGGCGGTC CTAAAGCGTT AGCTTTATTG 
TTTCGCACCT CTAAAAATCA TCCCGCACTG CGCGGTTACG TGATGAGCGT GTCATTAGTG 
GCAAATATTT TACGGATTGA ATTGGGTGGT CCACAAAAAT TTTCAGGCCA ACGTATTGAT 
GTGGCAAAGG TTGTCTATGG TCCACAACCT CATCACGAAA TGATAGCCCC AGCGATAAAA 
CTCACCTCTC GCGCCTGTGC GATTTGGTTT AGCTTTATTA CGTTACTTCC TTTCATTTGG 
GCAGGTTTAC GCTGGCTACA AACCCTGTGA
 
Protein sequence
MHSSFYQQLV EIDGALFEGF LVLFFALLLA RLAPLPREMQ PLIWFSHLAK QLAAKVNRPG 
RAPSQQATAG FLAMLLLVFP FWAIITFLLE LAAFPWFFEF LVLYLCLSDA GFSQVADEIA 
KALNREDNAS AKKLLQPWVV RDTDNLSEVG LTKATIEKLA TAPIYGTAST IFFFAIAGAP 
MVLAVRMIKQ LELSWPPIQP KYQYFCRTVH TLSTALLAIP AWLWSLSIAI QGGPKALALL 
FRTSKNHPAL RGYVMSVSLV ANILRIELGG PQKFSGQRID VAKVVYGPQP HHEMIAPAIK 
LTSRACAIWF SFITLLPFIW AGLRWLQTL