Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1311 |
Symbol | |
ID | 1169133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1366382 |
End bp | 1367170 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343256 |
Product | transcriptional regulator |
Protein accession | NP_716931 |
Protein GI | 24372889 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGATA AGAATAAGTT GAGTTTCTGT TTGGGGCGCT GTCGCATTGA CCCTTCCGAT AACTCAATTT CATTTCAAAC CTTGGGCGAT GAACCTCACC AAAATGAATC CGCTAAAATC TCGCTTCAAC CCAAGTTTAT TGAAGTGCTT AGCTATCTAG CCCTTCGTTA TCCTGAGGTG GTTACCCGTG ATGAGCTGAT TGATAAAGTA TGGGAGGGCA ACGTCTACGT GGGTACTAAG GCGCTCACTA ACGCGATTTG GCATTTGCGG CAGCAATTAT CCCCCTTCGC TCAGGAAAGC GGTGTGATTG AAACCGTGCG TAAAACCGGA TATCGATTGT TATTGCCGCC TATTTACGAC ACCTTTGATG ACGGTGAAGA GCAACGACAA ACCACCGAGG CTAAATTGCA GCATGCCACC AAACGCATGC GTGTTATGGC GATAGTGATG GGGGTTATAA CCTTTATCTG CGCTTTAGTG ATGGGTGTGC ATTTGTATCA AGATAAATTG CGGATGATGG ATACCCAACT TACTGTACTC ACTCGTGATC CTGGATCTGA GCGCTATCCT CAGTTATCCC ACGATAGGCG TTGGTTGGTC TATGGAGCCA GTCGACCAGG GTTGACTTCT AGTCTTTATC TTAAGGATTT TAAACGTGCA GATTTACCTG CACGTCAGTT AACGCCTTCA TCTTCATCCG AACTACGAGC AGTGTGGAGC TTAGATGATA CTGCATTATT TTTGCATCCC GCAGTCATGC TACAGGAAAG TGCACCATCA CTCAGTTGA
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Protein sequence | MKDKNKLSFC LGRCRIDPSD NSISFQTLGD EPHQNESAKI SLQPKFIEVL SYLALRYPEV VTRDELIDKV WEGNVYVGTK ALTNAIWHLR QQLSPFAQES GVIETVRKTG YRLLLPPIYD TFDDGEEQRQ TTEAKLQHAT KRMRVMAIVM GVITFICALV MGVHLYQDKL RMMDTQLTVL TRDPGSERYP QLSHDRRWLV YGASRPGLTS SLYLKDFKRA DLPARQLTPS SSSELRAVWS LDDTALFLHP AVMLQESAPS LS
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