Gene SO_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1231 
SymboltorD 
ID1169057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1281518 
End bp1282171 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content48% 
IMG OID637343182 
Productchaperone protein TorD 
Protein accessionNP_716854 
Protein GI24372812 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG TCGATATTAA TCATGCCAGA GCCTTAGTGT ATCAGCTGTT ATCTTCTCTG 
TTTGCCCGGG AAGTTAATGC ACAACGTCTG CAGGAACTCA CCAGTGATGC GGCGCAGCAA 
TTCTGGACAC AACTGGGCCA TGAGCCAGAG TTTAGCGCTC CTGTCGCGAC CATGCAGAAG 
GTACTGAATG ATTTACAGCG CAATGACGCC TTGCTCGAAC TCGCGGCTGA TTATTGCGGT 
TTATTCCTCG TGGGTACTCG GCACAGCGCC TCGCCTTATG CCAGCTTATA CTTAAACAGT 
GAGGATGAGC CCTTACTGTT TGGGCAGCAA CATCAGCAAA TGAGTGAATT TTTGCACCAG 
AGCAAACTGC AAGTACAGAG TCATTTCCCT GAGCCTGCCG ATCACTTAGC CGTAATGCTC 
GCCTATATGG GACATTTAGC CTGCCACAGT GAAGATGCTG CCCAGTTAAA TTTCCTCGAT 
GCTTGCATCG ACTCTTGGTT AGCTAAGTTT GTGGTAAAAG TTGTTGAGTG CGATAGCAAG 
CACCGCAATG GCTTTTACAG CGCTCTTGCT TCGCTGACTC TTGCTTGGGT CAAGCAAGAT 
AAACAACTGT TGGAACAGAC AATCAACTCA TCAGTAGAAC AAACCTTAAG CTAA
 
Protein sequence
MSNVDINHAR ALVYQLLSSL FAREVNAQRL QELTSDAAQQ FWTQLGHEPE FSAPVATMQK 
VLNDLQRNDA LLELAADYCG LFLVGTRHSA SPYASLYLNS EDEPLLFGQQ HQQMSEFLHQ 
SKLQVQSHFP EPADHLAVML AYMGHLACHS EDAAQLNFLD ACIDSWLAKF VVKVVECDSK 
HRNGFYSALA SLTLAWVKQD KQLLEQTINS SVEQTLS