Gene SO_1189 details

Gene Information

• Locus tag: SO_1189
• ID: 1169017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1232787
• End bp: 1233302
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637343142
• Product: hypothetical protein
• Protein accession: NP_716814
• Protein GI: 24372772
• COG category: [S] Function unknown
• COG ID: [COG3656] Predicted periplasmic protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCGTC ATCTTATTCG CACCACCGCT ATCGGTGCGT TATTTGTGAG TTCTGTGGTA 
TTTGCCACGC CTAGAATGAC GGTTGATTTG ACCTTGCCTG AAATTACCGA GGGGCAATAT 
CACCGACCTT ATGTGGCTGT ATGGGTTGAG GATGCCAAGG GACAAACGGT TAAAACCTTA 
AGTCTGTGGG TATGGGATGA AGGTCATAAA TGGCTTAAGG ATATTCGTCG TTGGTGGCGT 
AAAGCTGGAC GCGAAGATAT GAGCTTTGTC GATGGTATCG CCTCGGCAAC ACGTCCTGCG 
GGCCACTACA AAATTGATTG GGACTTAAAA GATGAGGCTG GCAAACCTTT AGTCCCCGCC 
TCTTACACTG TGTTTATCGA AGTGGTACGT GAGCATGGTG GTCGTGATTT AGTGAGACAA 
ACTTTTGATT TAGCGGCAGG GGATTTTACC GCCCAATTAC CCGCCACCAC TGAAACTGGC 
GTCATTGATA TTCGCTTAAG CGGCATGACT CGCTAA 

 

Protein sequence

MMRHLIRTTA IGALFVSSVV FATPRMTVDL TLPEITEGQY HRPYVAVWVE DAKGQTVKTL 
SLWVWDEGHK WLKDIRRWWR KAGREDMSFV DGIASATRPA GHYKIDWDLK DEAGKPLVPA 
SYTVFIEVVR EHGGRDLVRQ TFDLAAGDFT AQLPATTETG VIDIRLSGMT R