| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1006 |
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| Symbol | |
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| ID | 1168846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1040789 |
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| End bp | 1041751 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342966 |
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| Product | dienelactone hydrolase family protein |
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| Protein accession | NP_716634 |
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| Protein GI | 24372592 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTCAG ATGATAAGCC AGAACTAACC ACAGCACCTT CCCAAGCCAT CCCGCAGGAA
GCCTTTGATT GGTATGATGA GTATGCCCAC GGGATCATCG ACCGCCGTGA GTTTATGATG
CGCCTCGCAG GTTTAGTGGC ACTGGGTTTT ACCCTCAGCA CACTCACAGG CGCACTGATG
CCTAACTATG CCTTAGCCGA ACAAGTCTCC TTTAACGATC CCACAATCCA AGCCAGTTAT
GTGAAGTTTC CTTCCCCCGA AGGCTATGGC GAAGGGCGGG GTTATTTAGT CTTGCCAAGC
GCGTTGCTGA TCCCTGGCCA AAAGGCTGGC GATCCTAAGA CCTTAGATCC CACTAAAAAA
GCCCCCGTGG TGTTAGTGGT ACACGAAAAC CGTGGCCTTA ATCCTTATAT CGAAGATGTG
GCCCGCCGCT TAGCGGCCAA GGGTTATATC GCCTTTGCCC CCGATGCGCT TTACAGCCTT
GGTGGATATC CTGGTAATGA TGATGCGGGC CGCGCCATGC AAGCGAGCCT CGATAGAGCC
AAAATCGAGC AGGATTTTAT CGCCGCCGCC CGCTTTTTAA AGTCGCACCC GCAGAGTAAT
GGCAAACTCG GTGCCGTCGG ATTTTGCTTT GGTGGTTATA TCGTCAATAT GCTCGCCGCC
ATCATCCCGG ACGAGCTTGC CGCAGGCGTG CCTTTTTATG GCACCCCAGC GGTCACTGAG
CTACGCAGCC GAGTTAAAGG CCCGCTAATG TTACAATTTG CCGCTTTAGA TCAACGGATT
AACGATACAT GGGCCGAGTA TGAAGCCCAG CTAAAGGCCA ATAAAGCCGA TTACGCCGCT
TATCTTTACC CGAATGTGAA TCATGGTTTC CACAATGATT CCACCGCCCG TTATGATGAG
CCAACGGCTG AGCTCGCATG GGCAAGAACC TTGGATTTCT TTGGCAAACA TTTACTCGTA
TAA
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| Protein sequence | MSSDDKPELT TAPSQAIPQE AFDWYDEYAH GIIDRREFMM RLAGLVALGF TLSTLTGALM
PNYALAEQVS FNDPTIQASY VKFPSPEGYG EGRGYLVLPS ALLIPGQKAG DPKTLDPTKK
APVVLVVHEN RGLNPYIEDV ARRLAAKGYI AFAPDALYSL GGYPGNDDAG RAMQASLDRA
KIEQDFIAAA RFLKSHPQSN GKLGAVGFCF GGYIVNMLAA IIPDELAAGV PFYGTPAVTE
LRSRVKGPLM LQFAALDQRI NDTWAEYEAQ LKANKADYAA YLYPNVNHGF HNDSTARYDE
PTAELAWART LDFFGKHLLV
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