| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1001 |
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| Symbol | chaA |
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| ID | 1168842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1032741 |
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| End bp | 1033838 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342962 |
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| Product | calcium/proton antiporter |
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| Protein accession | NP_716629 |
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| Protein GI | 24372587 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGACAT TTATCAAAGA CGAATTTGCC CTACTACTCG GAATACTCAC CTTAGTATTC
TTTAAGACGG GCGGTGATAG TTTACTGGCC GATGGCACCG CACTATCAAC CTACATTCCC
GTCTCTCTCG CCCTCTTAGG CGTAGTGACT TGGGCTATTT TTTCCGTGGT GCGGCACTCT
GACGCCCTTG CGATAAAACT GGGTGACCCC TATGGCACCT TAATTTTAAC CCTGTCGGTC
ATTTCACTCG AAGTGGTGAT GATTTCCTCG GTAATGTTAA CTGGCGAACC CAACCCAGTC
ATGGCTCGGG ATACTATGTT TGCCGTAGTC ATGATTATTA CCAACGGGTT AGTGGGATTC
ACCCTACTGC TGGGCGGTTG GCGCTATCAT ACCCAACACT TCAACTTAGA TGGAGTTAAA
TCCTATTTAG TGGCGATCAT TCCCCTTGCC CTACTCTGTT TAGTGTTACC GAATTTTACC
GAGGGTGGCA CTGTCGGTGG TATGTCAAAG CCAATGTCTT GGATGCTGAT CATTATTTCG
ATTTTGCTCT ATGGCATCTT TTTAGTGGTC CAAACCAAGA GCCACAGCCA CTTCTTTGTT
GATGCCGATA ATGAAGATCA CGAAGAGCAC CACGGCATAT TGCGCAGCAA TATCTACCAT
ACCTTACTGT TGATTGGTTA CTTGTTGGTG GTAATTTTGC TGGCAAAAAC CTTAGCCATG
CCCATTAATT ACAGTGTCGC GTCCCTCGGT GCGCCGCCAG CACTTGGCGG TTTTGTTGTT
GCCTGTTTGA TCTTATCCCC CGAGGCTGTC GGTGGTTTTA AGGCTGCACT TAACAATCAA
CTTCAGCGGG CGATGAATCT GTATTTTGGC TCAGTGCTAG CCACGATTGC GCTCACAGTA
CCTGCCGTGT TGATTGTAGG TAGTGTCATA AATCAAGAGG TGCATTTAGG CTTATCGGCG
GCGGATATGG TACTGCTAGC CACCACTTTA ATGGTCTGCA AAGTAAGCTT TAGTAGCGGC
CGCACTAATG CATTACATGG TGCGACCCAT TTAGTACTGT TTATCGTGTA TCTATTTTTG
ATGTTTGAGC ATGCATAA
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| Protein sequence | MKTFIKDEFA LLLGILTLVF FKTGGDSLLA DGTALSTYIP VSLALLGVVT WAIFSVVRHS
DALAIKLGDP YGTLILTLSV ISLEVVMISS VMLTGEPNPV MARDTMFAVV MIITNGLVGF
TLLLGGWRYH TQHFNLDGVK SYLVAIIPLA LLCLVLPNFT EGGTVGGMSK PMSWMLIIIS
ILLYGIFLVV QTKSHSHFFV DADNEDHEEH HGILRSNIYH TLLLIGYLLV VILLAKTLAM
PINYSVASLG APPALGGFVV ACLILSPEAV GGFKAALNNQ LQRAMNLYFG SVLATIALTV
PAVLIVGSVI NQEVHLGLSA ADMVLLATTL MVCKVSFSSG RTNALHGATH LVLFIVYLFL
MFEHA
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