Gene SO_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0981 
Symbol 
ID1168824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1010794 
End bp1011435 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content43% 
IMG OID637342945 
Productsensor histidine kinase 
Protein accessionNP_716610 
Protein GI24372568 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTAG ACCAGAACAC CCCCTTGGCT CGTATGCGTT TTACACTCGA ACTAATTCGA 
CCACAAATCG ATGCCCATTA CGCTAAGCGA TTAAATGAAG ATATTGAAGA TATTGAGCAA 
CTTGCGGCAA ATTATTTATC CTTTGCTCGC TTAGAACACA AGGAAGAAGC CTTAACTCAA 
GAGTCACAAT CTTTAGCGAT ATTTATGGAT AAATTGGCTC AAAAATATGC AATGTACCGA 
CCTCAACTTG ATATTCAGTT TCACCATCAA TCGCAGCAGG CTCATTTCGA TCCTATAGCG 
ATGACCATTG CAACCCAAAA CCTGATCCAA AATGCGATGC GATTCGCACA CCATAAAATT 
CATGTGCACT TCTACCAAGA GGCAGGGATA AATCGGTTCA GTGTCGAAGA TGACGGGCCG 
GGGTTTGAAG GTAAAGGTAA AAAACTCTTT GCCGCCTTTG AACGGGATTC CCAACAGAGC 
GATACCAGTG GTTATGGTTT AGGGCTATAT ATAGTTAAAA AAATCGCCAC TTGGCATTAT 
GGCCAGCTGG AACTCAGCCG CTCACAAACC TTGGGCGGTG CCGAAATCAG CATTATTTGG 
GATGATAGGT TATTGCCTAA AGCTGATATA AATTCTGACT AA
 
Protein sequence
MGLDQNTPLA RMRFTLELIR PQIDAHYAKR LNEDIEDIEQ LAANYLSFAR LEHKEEALTQ 
ESQSLAIFMD KLAQKYAMYR PQLDIQFHHQ SQQAHFDPIA MTIATQNLIQ NAMRFAHHKI 
HVHFYQEAGI NRFSVEDDGP GFEGKGKKLF AAFERDSQQS DTSGYGLGLY IVKKIATWHY 
GQLELSRSQT LGGAEISIIW DDRLLPKADI NSD