| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0854 |
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| Symbol | |
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| ID | 1168701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 875323 |
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| End bp | 875694 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637342824 |
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| Product | type IV pilin, putative |
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| Protein accession | NP_716485 |
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| Protein GI | 24372443 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTT TACAAAAAGG GTTTACCCTG ATTGAACTGA TGATCGCCGT TGCCATTATT
GGCATTCTCG CCGCAATTGC GATCCCTTCG TTCAATGAGT ACTTAAAGCA AGGCAGACGC
TTCGATGCGC AGCAATATTT AGTCACCAGT GCTCAAGCGT TAGAACGCCA TTATTCCCGC
AACGGCCTGT ATCCCGCTTC GCAGAGTTTA GCTAACAGTC CCTATTACAG TTTCAGCTAT
ACGCCCACAG CAGATAAATT CGGTTTTAGC CTTAAAGCCG TACCGACAAA CCGTCAGTCA
GATCCCTGTG GCACCTTAAG CCTCGACCAC AAGGGCGTGC GCGTCCCCGC CACAAATTGT
TGGAGCCATT AA
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| Protein sequence | MNTLQKGFTL IELMIAVAII GILAAIAIPS FNEYLKQGRR FDAQQYLVTS AQALERHYSR
NGLYPASQSL ANSPYYSFSY TPTADKFGFS LKAVPTNRQS DPCGTLSLDH KGVRVPATNC
WSH
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