Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0719 |
Symbol | |
ID | 1168577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 734402 |
End bp | 736645 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342702 |
Product | TonB-dependent receptor, putative |
Protein accession | NP_716352 |
Protein GI | 24372310 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein [TIGR03304] outer membrane insertion C-terminal signal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACCGT TGCCGCTAAG TCTGTGCGCC CTTGCCGTAG CAAGTGCATT GCCCGTTTGG GCAGAAGAAC AAGCTAAACC ACTGATTAAC GAAGTTATTG TGGTCTCAGG CTCCCGTATG GAACAAAACA TTGAGCAGGT GGCAGGATCT ATTCTGGTCA TAGATGAAGA AGCCATTGAA CGCAATATGA GCAATGATTT TGGTAGCCTG TTCCGTAACG AATCGGCTGT CGATATCAAG GGTGGCGCGG GCAAACCAAC CTCAGTGACG ATTCGCGGTA TCGGCGGTAA TCGGGTAATG ATGGTGAAAG ACGGCGTACG GGTAAATAAC CAGTATGCTT CGCCATTAGG CCCAGGTGCT GAAGGCACAG GCCGTGGTTT AACCGAAGTG CAAAGTCTTA AGCAAATTGA AGTAGTTAAA GCCGCTGCAT CCACTATGTA CGGCTCCGAT GCCCTCGGTG GCGTGGTAGT GATGCGCACA AAAGATGCCA GCGACTACCT GCGGGGCGAA GATTATTATG TGTCGCTCAA TGCGGGCTAT TCGGGCATCA ATAACGAGTA CTCCGGCGGT TTTACCAGCG CAGCGGCCTA TAGCGATTTT GAGAATTTGC TAACCTACCA GCACCGCAAG GGCGAAGAGT TACCGAACTA CTTTGATACT CAGCCTGAAA GCGATCTGTT ACAAGACAGC CTGCTATTCA AGAGCAAATA CCGTTTTAAT GAGCACACCA CAGTGCAGCT CACCCTCGAC TACCTAGAGC AAACACTTGA ACGCTGGGAA GATAAGCTCA ATCGTGCCCA AGTGCCACAG GAGCGGATTG ATACCGATCG CGATACCCAA GTGATCAACG GTGCCCTGCA ATTGCGCTCC GATAAAGCCA CTTACTTACA CGATGATTTG ACCGTTACCG CCTATTTTGG CCAAACAGAG CAACTCGAAC ACCGTGATTA TTTTGATTTG CGTACCGCAG CGCGCCCACT TACCGAATAT CGCGACTATG AATTTAAAGA TCAGCGACTG GGTTTAACCA GCACCTTCAG CAAATACATA GGCGCTGAGG GATACGGCCA TCAGCTCACC TACGGTATGG ACTATGAATG GTCCCAAATG ATGCGCCATC GCAACAATAA TATCGCCAGT AACGGCGGTG ATTGGCAAAC CGAAACGCCC TTTACCTTTG CCGATACCGA TAGCAACCGT TTAGGGCTAT TTTTGCAGGA CGATATCACC CTGTTAAATG GTGATTTAAA CCTGATTGGC GGTTTACGTT ATGACTATTT CCGTAACAGC CCCGACCAAC AGCAAGCGAT GGAAGCAGGT AAAGATCCCG CCGACTTTGC GGTAATGAGC GACACCTTTT GGTCACCCAA AGTGGGGCTC GTTTATAAAC TTACCGACAC AGTGAGTGCC TATGCTCAAT ATGCCTATGG CTATAAAATG CCTACGCCCG ATCAAAAATG GGGTGAGTTA GAGGTCGATG GTGGCTCGAT GACCGATGTG ATCATTCAAG CCAACTATGA CTTAAAGTCT GAGCAATCCC ATACGTGGGA ACTGGGTATC CGTGGCAATC ATGCAGATAC TCAATATGAA CTCACCACCT TCGACACCCA CGCGGTCGAC TTTAGTGATT GGCAATATGT CAGCTTTAAA CCGCCAGTGT TTGGTCCGGT GATGCAGCCC ATGGAGTTCA AATACCAGTA CTTCAACCGC GATCAAGTGA CCCTCTATGG CGCAGAGGCC CAAGCCAACC ATTGGCTGAC AGATTCTATC GAGCTATGGG GCAATATCTC CTATACCCAT GGAACCGATG AAAACGGCCA AAACCTTAAC AGCGTTAGTC CGCTAAAAGG TAACCTAGGG GTGAATTGGT ATAGCGATAT TGGTGGAATG GAAACCGATA TTGGCGCAGT GGTACGCTGG GCCGATAAGA TGGACCGCAC CAACGATATC AACCTGACCA TTGATGATAT TTGCGTGATG GGCCAATGTA TTCCTAAAGA AAGCTTTAAC GAAGTTTACA ACACCGCGGG TTACGCCGTG CTTGACTTAA CCATGGGCCT GCACGTTACC GACAATCTGC ATCTGCGTGC TGGGGTGTAT AACCTGTTTG ATAAGGAATA TGTTGACTAC GCCGATGTAG CTGGCCAATC CGTGTTCTTA CTCAATAGCA CCATGAACTT GCAAAAGGAT GATTTCACCC AACCTGGGCG TTATTTCAAC CTGAGTATGA ATTATCAGTT TTAA
|
Protein sequence | MKPLPLSLCA LAVASALPVW AEEQAKPLIN EVIVVSGSRM EQNIEQVAGS ILVIDEEAIE RNMSNDFGSL FRNESAVDIK GGAGKPTSVT IRGIGGNRVM MVKDGVRVNN QYASPLGPGA EGTGRGLTEV QSLKQIEVVK AAASTMYGSD ALGGVVVMRT KDASDYLRGE DYYVSLNAGY SGINNEYSGG FTSAAAYSDF ENLLTYQHRK GEELPNYFDT QPESDLLQDS LLFKSKYRFN EHTTVQLTLD YLEQTLERWE DKLNRAQVPQ ERIDTDRDTQ VINGALQLRS DKATYLHDDL TVTAYFGQTE QLEHRDYFDL RTAARPLTEY RDYEFKDQRL GLTSTFSKYI GAEGYGHQLT YGMDYEWSQM MRHRNNNIAS NGGDWQTETP FTFADTDSNR LGLFLQDDIT LLNGDLNLIG GLRYDYFRNS PDQQQAMEAG KDPADFAVMS DTFWSPKVGL VYKLTDTVSA YAQYAYGYKM PTPDQKWGEL EVDGGSMTDV IIQANYDLKS EQSHTWELGI RGNHADTQYE LTTFDTHAVD FSDWQYVSFK PPVFGPVMQP MEFKYQYFNR DQVTLYGAEA QANHWLTDSI ELWGNISYTH GTDENGQNLN SVSPLKGNLG VNWYSDIGGM ETDIGAVVRW ADKMDRTNDI NLTIDDICVM GQCIPKESFN EVYNTAGYAV LDLTMGLHVT DNLHLRAGVY NLFDKEYVDY ADVAGQSVFL LNSTMNLQKD DFTQPGRYFN LSMNYQF
|
| |