| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0524 |
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| Symbol | |
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| ID | 1168394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 547338 |
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| End bp | 548243 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637342518 |
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| Product | HlyD family secretion protein |
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| Protein accession | NP_716160 |
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| Protein GI | 24372118 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCGGGTT ATGTCGTTTT ATCGGATGTG ACCGATAACC AGCACGTACG CAAAGGTGAG
TTATTAGCCC AGCTCGAAGA TAACCAGTTT ATCGCTAAAG TAAACCAAGC CGAGGCGTCA
CTCGCTAGTG CTAAAGCCGA TCTACAGACC TTAGCCGCCA AGGTGGAGTT ACAGCATGCG
CTGATCAGCC AAGCGAGCGC CGCAGTGGTC GCAGCGAAGG CGGATAACAT CCGTGCAGAG
CAGCAGTTAA GTCGTGCCAA AAAGTTAAAG GTCAGCAATT ACAGCTCGCA AGACGATGTC
GACCAATTGC AAGCGGGGTT TGATGCTGCT GCGGCGCACC TCGATGAAGC CAAGGCACTG
CTGGTGGCGA AACAACGCGA ACTTGCCGTG TTTAATGCCC AGCTTAATCA AGCCCGTTCC
GTGGTTGAAC AGGCCGATGC TACATTGGCG CTGGCTAATA TCCAACTTAA TGATACCCGC
GTGACAGCGC CCTTTTCTGG GGTGATAGGT AAACGCGGTG CGATGGTGGG GCAGTATGTG
CAGCCCGGCC AAGCTCTCTA CAGTTTGGTT CCGGATGGGG CTGTGTGGAT CACGGCGAAC
TTTAAAGAAA CCCAGATCCA ACATATGCAA CCCGGACAAG TGGTACAGGT GAGTCTCGAT
GCGTTTCCCG ACAAGACCTT TACTGGTGTT ATCGATAGCC TGTCTCCGGC ATCCGGAGCC
AAATTTAGTT TACTGCCCGC CGAAAATGCT ACGGGTAACT TCACTAAAAT TGTGCAACGT
ATTCCGGTGC GGATCCGTTT AGAGTTAACT GAAGATGCTC GGATCGTGCC CGGCTTAAGT
GCGGTGGTGA AGGTTGATAC TTCATCCCAT CCAACGGCTG CGATAGCAGC GACTTTAGGT
CGTTAA
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| Protein sequence | MPGYVVLSDV TDNQHVRKGE LLAQLEDNQF IAKVNQAEAS LASAKADLQT LAAKVELQHA
LISQASAAVV AAKADNIRAE QQLSRAKKLK VSNYSSQDDV DQLQAGFDAA AAHLDEAKAL
LVAKQRELAV FNAQLNQARS VVEQADATLA LANIQLNDTR VTAPFSGVIG KRGAMVGQYV
QPGQALYSLV PDGAVWITAN FKETQIQHMQ PGQVVQVSLD AFPDKTFTGV IDSLSPASGA
KFSLLPAENA TGNFTKIVQR IPVRIRLELT EDARIVPGLS AVVKVDTSSH PTAAIAATLG
R
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