Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0500 |
Symbol | |
ID | 1168371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 525133 |
End bp | 526764 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342495 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_716136 |
Protein GI | 24372094 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGGG TAAGAAGTAT ATCGATAAAG CTACGTTTGA CTCTCTTGCT TGTTGCATTG CTCGCAACGA TGTTTGTTAT GGGATTGAGC CACAAGCAAT CAGCCGACAC CATAAATGTC ATGCTAAACA ACATGTATCT CAACCAGCTC GTGCCTATCA CCGATGTGGC AAATGCAAAC ATGCAAGCCA TCTACCACCA TCGTGAATTA TTCAACTACG TTATCGAAGC AAAACAGTCA GAAATGGACC GAATTGCGGG TGTCATGGAT AAATATGAAA CCCAAATGAT GGCATTACTC AATAAATATC GCGTGACTGA GCTGACCCCT GACGAAACCC GTTTACTGGC GGATTTTGAC CGCCAATGGC CGCCTTATAA AGCAGCAGCA AAGAAAATGA TGGACGCGTC ATATCGCAAT GATAACGAGG CAGCCATGCA GCTGATGAAG TCCGAGGTAA CGCCAACCTT TCAGCAAGCA GATGCCACTC TCTCTGCGAT TGTGAACAAG AACGTCGATC TAGGGAAAAA GGCTTATGAC GACAGCGATG TCGTGGTTGC CCAGCTAGGG CAAGAGTTCG TGATAACCAT GGGTCTGGTT CTGGTTATCG CAGCTATTTC TGGGGCGTTA GTTATACGTA GTATCCTCGC ACCATTGGAC CAAACTGTTA CCGACCTTTC CCATATTGCC AGGGGTAATC TGGTGGATAC TATTCCGCCC TCTGGTAATG ATGAGCTTAC CAAGCTGCAG CACTCGATGG CATCGACTCG CAAGTCACTT AAAGAAACTA TTAATACCGT TTTGCATATC TCCGAAGAGC TGGGTTCTTC TGCGGCCCAG CTATCCAGTG CTGCTCAGCA AGTGATGACC AGCTCTGAAA TGCAAGCCCA AGCAACAGCC TGCTCAGCTG CCTCCATTGA AGAGATGTCC ACTTCGATAG CACAACTTTC TGATTCGGCT AACAGCGCAA ATGAACAAGC CATGACATCA GGCAATTTGG CGCAACAAGG TGAGCATCAA GTCGAGGGGG TCTCTCGGGA AGTGCGAGCA GTGACCGATG CCATCAATCA ATCGACCACG CAAATCCGCC AGCTGGCAGA TGATGTCACC AAGGTGGGCC AAATCACCGT CATGATTAAA GGCGTGGCAG ACCAAACCAA CTTGCTGGCA CTTAACGCTG CCATTGAAGC GGCCCGGGCT GGTGATATGG GACGTGGGTT CGCCGTGGTG GCTGACGAAG TACGCCAATT GGCAGAGAGA ACAACCAAAG CCACCCAAGA AATCGACAGC ATGATAAGTA GTGTGCAATC CAAGGCCATG GAGACGGTCA GCACCATGGA CAAATATGTG CAGAGCATTG AAAACGTTCG CCTTAACACA GCCCAGGCCA GTGACTTGAT GGCCAAGGTA GACCAAAGCT CCCAAGCGGT TGTCGGGCTG ATGGGCGAAA TCAACGTCAT GCTGCATGAA CAATCCTCTG CAAGCCAACT GATTGCCCAG TCTGTTGAAG AGGTGAACAA CATGTCACAG GAGAACGTCT CCGCTTCAGA GTGTGTCAAT GGTGAAGCTG TGCACCTTAC CCAGATTGTA GGGGAGCTCA AGAAGAGCGT CTCCATCTTT AAATTGAGCT AA
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Protein sequence | MNWVRSISIK LRLTLLLVAL LATMFVMGLS HKQSADTINV MLNNMYLNQL VPITDVANAN MQAIYHHREL FNYVIEAKQS EMDRIAGVMD KYETQMMALL NKYRVTELTP DETRLLADFD RQWPPYKAAA KKMMDASYRN DNEAAMQLMK SEVTPTFQQA DATLSAIVNK NVDLGKKAYD DSDVVVAQLG QEFVITMGLV LVIAAISGAL VIRSILAPLD QTVTDLSHIA RGNLVDTIPP SGNDELTKLQ HSMASTRKSL KETINTVLHI SEELGSSAAQ LSSAAQQVMT SSEMQAQATA CSAASIEEMS TSIAQLSDSA NSANEQAMTS GNLAQQGEHQ VEGVSREVRA VTDAINQSTT QIRQLADDVT KVGQITVMIK GVADQTNLLA LNAAIEAARA GDMGRGFAVV ADEVRQLAER TTKATQEIDS MISSVQSKAM ETVSTMDKYV QSIENVRLNT AQASDLMAKV DQSSQAVVGL MGEINVMLHE QSSASQLIAQ SVEEVNNMSQ ENVSASECVN GEAVHLTQIV GELKKSVSIF KLS
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