| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0281 |
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| Symbol | |
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| ID | 1168163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 288762 |
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| End bp | 289841 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637342290 |
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| Product | type IV pilus biogenesis protein PilM |
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| Protein accession | NP_715921 |
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| Protein GI | 24371879 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAA ATTTATGGAA GCGTCAGGCT CCGCAAATGG TCGGGATTGA TATTGGTTCC
CATGAAGTAA AGGCCATTTT GCTGGGTAAG ACAGCTGATG GATACAAAAT TTTAAGTCAT
GCAGCGGTTC CCGTAAAAAA GGGGGCAATT AATGATCATG ATATTCGTGA TGCTGATGCC
GTTGTTGAAT GTTTAAGACA GATTAAGCGC ATTTTGCCTA AATCGGTAAA ATATGCGGCT
GTTGCGGTCT CTGGCTCAGC GGTGATGACC AAGGTCATCT ATATGGATGC TTCGCTTAGC
GAAGAGGAAA TGGAAGCGCA AATCGAGATT GAGGCCGATA ACCTGATCCC TTATTCCCTT
GATGAAGTCA GCATTGATTT TGAAACGCTA AACGTCAACA GCACCGATCC ATCTAAGGTC
GATGTGCTAC TCAGTGCTTG TCGTACCGAC AATATCGATA CCAGAGTCGA TGCGCTCGAT
GAGGTTGAGC TAGAAACCAA AGTCGTTGAT GTTGAAGGTT ATGCTTTAGG TCGAGCAGTT
GAGTTAGTCC TTGGGCAATT ACCCGAAGGA GCTAGACAGA AAGCCGTCGC AATGGTTGAT
ATCGGTGCGA ATATGACGAC TTTCTGCGTG GTAGAGTCCG GCGAAACCAC CTTTATCCGT
GAGCAAGCCT TTGGTGGTGA GTTATTTACG CAGTCGATTC TCTCTTTTTA CGGCATGTCC
TACGAGCAAG CCGAAAAAGC CAAAATCGAG GGGGATTTAC CGCGTAATTA TATGTTTGAA
GTGTTATCTC CCTTCCAAAC GCAATTACTG CAACAAATTA AGCGAACACT GCAAATTTAT
TGCACCTCGA GCGGCAAAGA TAAAGTTGAT TATCTCGTTT TATGCGGTGG AACCTCTAAA
CTGGAAGGTA TGGCTAACTT ATTGACCAAT GAGTTAGGTG TCCACACCAT TATTGCCGAT
CCTTTCCAAG GGTGTCTGCA TGCAGATGAG TCCGTTAAAA ATATACTGCA ACCTAGCATC
AGCAAATATA TGGTTGCTTG TGGCTTAGCG CTGAGGAGCT ACGGTCAATG GCGAACATAA
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| Protein sequence | MLSNLWKRQA PQMVGIDIGS HEVKAILLGK TADGYKILSH AAVPVKKGAI NDHDIRDADA
VVECLRQIKR ILPKSVKYAA VAVSGSAVMT KVIYMDASLS EEEMEAQIEI EADNLIPYSL
DEVSIDFETL NVNSTDPSKV DVLLSACRTD NIDTRVDALD EVELETKVVD VEGYALGRAV
ELVLGQLPEG ARQKAVAMVD IGANMTTFCV VESGETTFIR EQAFGGELFT QSILSFYGMS
YEQAEKAKIE GDLPRNYMFE VLSPFQTQLL QQIKRTLQIY CTSSGKDKVD YLVLCGGTSK
LEGMANLLTN ELGVHTIIAD PFQGCLHADE SVKNILQPSI SKYMVACGLA LRSYGQWRT
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