| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0101 |
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| Symbol | fdnG |
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| ID | 1167998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 108703 |
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| End bp | 111717 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637342112 |
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| Product | selenium-containing formate dehydrogenase, nitrate inducible, alpha subunit |
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| Protein accession | NP_715743 |
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| Protein GI | 24371701 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAC GCCAGTTTTT TAAACTGTGT GCGGCCGGAG CGGCAACCTC AGCGATTTCA
GCGCTGGGAT TGATGTCCGA AAAGGCCTAT GCAGCAGTGC GAGAGTTTAA GCTGCTCGGA
GCTAAAGAAA CCCGTAACAA CTGCCCGTAT TGCTCGGTCG GTTGCGGCCT GCTGATGTAC
AGCCAAGGCA GTGGGGGTAA AAACTCCGAA CATGCTATTT TCCATATCGA GGGTGATGCT
GATCATCCCG TCAACCGAGG TGCATTGTGC TCGAAGGGTG CAGGACTTGT GGATTATGTC
AACAGCCCAC ATCGTTTACA GTATCCAGAA TATCGCGCTC CCGGCAGTAA CAAATGGGAA
CGGATCAGCT GGCAAGATGC CTTTAAGCGT ATTGCACGTT TGATGAAAGA TGACCGTGAT
GCGAACCTGA TTGAAAAGAA CGCCGATGGC GTAACGGTTA ACCGTTGGTT AACCACTGGG
ATGATGACGT CATCCGGTAT GGCTAATGAG AGCGGCTTAG CGACACAAAA ATTTGCTCGC
GCTTTAGGCC TAGTAGCTAT CGATACTATT GCACGTAACT GACACTCCCC AACGGTAGCA
AGTCTTGCTC CAACATTTGG GCGTGGTGCC ATGACCAACC ACTGGATCGA TATTAAAAAT
TCTAACGTAG TGATTATTAT GGGCGGTAAT GCCGCAGAAG CTCACCCTGT CGGATTCGGC
TGGGTTACGG AAGCTATGCA GCATAACAAT GCTAAGTTGA TTGTGGTTGA CCCACGTTTC
AACCGCAGTG CGTCATTGGC AGATCACTAT GCCCCAATCC GCTCAGGAAC TGACATTGCA
TTCCTTCTGG GTGTGATCCG TTATTTGATT TCGACCAATC AAGTTAACTT CGATTATGTG
AAAGCCTATA CCAACGCCAG TTATCTGGTG CGGGATGATT TTGACTTCCA TGACGGCCTA
TTCTCAGGCT TTGATGAAGC AAAAGGCGAG TACAACAAAG AATCCTGGTT CTACCAACTC
GACGAAGACG GCTATGCCAT AGTGGATGAA ACACTTGAGC ACCCGCGTTG TGTGTGGAAC
TTACTCAAAC AACACGTAGA ACGTTATGAT TTTGCAACGG TAAGTAATAT CACTGGTACG
CCAACAGAAG ATTACCAAGT GGTATGTGAT GCCATTGCGA GCACTCATAC TAAAGATCGT
GTGGCGACAT TTATGTATGC GCTGGGCTGG ACCCACCATA GTAAAGGTGC GCAGAACATC
CGTTCTATGG CGATGATCCA GTTATTACTG GGCAACATAG GTCAGTTAGG CGGTGGTGTT
AACGCATTGC GCGGTCATGC CAACGTTCAA GGTTCAACCG ATATGGGTCT ACTGGCTCAA
AGTTTACCTG GTTACCTTAA ACTGCCAAAC GATAAAGAAC CTACCTTAGC AGCTCACTTG
GCGGCGAACA CACCTAAGCC ATTGCGCCCA GGTCAAACCA ACTACTGGCA AAACTATCCG
AAGTTTTATG TGTCCCTGCT CAAAGCCTTC TGGGGCGAGA ATGCGACGCC TGAAAACGAG
TTCGGTTATC AGTGGTTACC TAAGTGGGAT CAAATGTATG ACTTCGGTAA GCATCTGGAC
ATGATGTACC GTGGCAAAGT GAACGGTTGT ATCGTGCAAG GGGTTAACGC CATTAACTCA
ATGCCAAACC GTAATAAGAA CATCAAAGCA CTGAGTAACC TTAAGTTCCT CGTAGTGCTT
GATAACTTGT CATCGGAAAC CGCAACCTTC TGGCAAAACG AGCCTGGTTT TAACGAAGTC
GATACCGCCA GTATTCAAAC CGAAGTATTC CGCCTACCTG CGACAGTGTT TGCGGAGGAA
GAAGGTTCAA TCGTTAACTC TGGTCGTTGG ATGCAATGGC ACTATAAATG GGCTAACCCT
CCTGGCGAAG CGATGTCGGA CTCAGAGATT GTCTCTGGTC TGCTGCTGGA GTTGAGAAAG
TTATATCGCG AAGAGGGCGG CAAACTGCCT GAGCCGATTC AAGCGATTAA CTGGAACTAT
ACCGATCCGC ACAACCCTAG CTCTATCGAG CTGACGAAAG AGTTGAATGG TTACGATGTC
GCTACCAAGC GTCAGATCAG CAGCTTTGCT GAATTGAAGG CCGATGGTAG TACTGCGAGC
GCCTGTTGGG TTTATGCGGG TTCTTGGACT GAAGCCGGTA ACCAAATGGC TCGCCGCGAT
AACCATGATC CATCGGGTAA AGGTATTACG CCGGGTTGGG CCTTCGCATG GCCTCTTAAC
CGCCGCGTCC TCTACAACCG TGCCTCCTGT GATGTGAACG GTAAACCTTG GGATGAGCAC
CGTAAGATTG TCGAGTGGAA AGACGGTAAG TGGGAAGGGA TAGATGTACC CGACTTCAAT
GCCAAGTTGA ATCCACAGGA AAGTGCGCAT CCTTTCATTA TGCAGGCTGA CGGCGTGGGT
CGTTTCTTCG CGCTCAAACT GCTTAAGGAA GGACCGTTCC CAGAGCATTA CGAGCCAGTC
GAATCGCCCA TCGGCACCAA CCCACTGCAT CCCAATGTGG TGCACAGCCC TGTGCTGCGT
TGGTTCGAAG GGGTAAAAGA CACCATTGGT ACTAAAGAGG AATATCCCTA CGCCTGTACC
ACTTACTCAC TCACAGAACA CTTTAACTTC TGGACGACAC ATTGCCGTTT AGCGGCGATT
GCCATGCCAG AGACCTTTGT CGAAATGAAT GAGCAATTGG CGGCAGAAAA AGGCATCAAG
AATGGCGATT GGGTGAAAGT GAGCTCGAAA CGCGGCCACA TTCTCACGAA AGCCTTGGTG
ACTAAGCGTA TGCGCCCACT GCAGGTCAAT GGTCAAACAG TACACACGCT AGGTATTCCA
CGTCACGGTA GCCATAACGC GCTTACACGT AAGTCCTATA GTTGTAACGT CCTTACCACT
GAGATGGGTG ATGCCAACAC GGGTGTTCCT GAGTACAAAG CGTTCCTCGT GAATGTTGAA
AAGGCGGAGG TCTGA
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| Protein sequence | MNRRQFFKLC AAGAATSAIS ALGLMSEKAY AAVREFKLLG AKETRNNCPY CSVGCGLLMY
SQGSGGKNSE HAIFHIEGDA DHPVNRGALC SKGAGLVDYV NSPHRLQYPE YRAPGSNKWE
RISWQDAFKR IARLMKDDRD ANLIEKNADG VTVNRWLTTG MMTSSGMANE SGLATQKFAR
ALGLVAIDTI ARNUHSPTVA SLAPTFGRGA MTNHWIDIKN SNVVIIMGGN AAEAHPVGFG
WVTEAMQHNN AKLIVVDPRF NRSASLADHY APIRSGTDIA FLLGVIRYLI STNQVNFDYV
KAYTNASYLV RDDFDFHDGL FSGFDEAKGE YNKESWFYQL DEDGYAIVDE TLEHPRCVWN
LLKQHVERYD FATVSNITGT PTEDYQVVCD AIASTHTKDR VATFMYALGW THHSKGAQNI
RSMAMIQLLL GNIGQLGGGV NALRGHANVQ GSTDMGLLAQ SLPGYLKLPN DKEPTLAAHL
AANTPKPLRP GQTNYWQNYP KFYVSLLKAF WGENATPENE FGYQWLPKWD QMYDFGKHLD
MMYRGKVNGC IVQGVNAINS MPNRNKNIKA LSNLKFLVVL DNLSSETATF WQNEPGFNEV
DTASIQTEVF RLPATVFAEE EGSIVNSGRW MQWHYKWANP PGEAMSDSEI VSGLLLELRK
LYREEGGKLP EPIQAINWNY TDPHNPSSIE LTKELNGYDV ATKRQISSFA ELKADGSTAS
ACWVYAGSWT EAGNQMARRD NHDPSGKGIT PGWAFAWPLN RRVLYNRASC DVNGKPWDEH
RKIVEWKDGK WEGIDVPDFN AKLNPQESAH PFIMQADGVG RFFALKLLKE GPFPEHYEPV
ESPIGTNPLH PNVVHSPVLR WFEGVKDTIG TKEEYPYACT TYSLTEHFNF WTTHCRLAAI
AMPETFVEMN EQLAAEKGIK NGDWVKVSSK RGHILTKALV TKRMRPLQVN GQTVHTLGIP
RHGSHNALTR KSYSCNVLTT EMGDANTGVP EYKAFLVNVE KAEV
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