Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0057 |
Symbol | |
ID | 1167956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 64299 |
End bp | 65660 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342071 |
Product | Trk family potassium uptake protein |
Protein accession | NP_715699 |
Protein GI | 24371657 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTCAAT GGCATCCTTC GCTCCCCCTT GAGCAAACTC AGAAAGCCGG TAAAAAACTC TTTGGCGCGC CGCCCTTTAT CTTAAGTGCA AGCTTTGCTC TGCTGATCTT GGTTGGCACT TGTTTGCTTA AACTGCCTAT CGCCACAGAG ACCCCCATTT CCTGGCTGCA AAGCCTATTT ACCGTTACCT CTGCAGTGAC GGTTACCGGA TTGGTGGTAG TCGATACGGG CACTGTATTT ACCCCCTTTG GCCAAGTGAT TGTCGCACTC TTAATCCAAT GCGGTGGATT AGGATTAATG ACCTTTGCCA TCGTTACCCT CATTGCCCTT GGCGGAAAAA TCGGTTTCTT GCAACAAACC GTGGCAAAAG AGGCATTTAA TCAAACTGAC ACCTCCACCT TAGTCTCGAC GGCTAAAGCG GTTTTGGTGT TTTCACTGCT GGTCGAAGCC GTAGGGATGT TGATTTTATC TGTCCATTGG AGCGACGAGC TAGGTTGGCA AACCAGCCTG TTTCATGGCT TCTTTTATAC CATTAGCGCT TTTAATAACG CGGGTTTTGC CCTAAGCGCA GATAGCTTGA TGCCCTATGT GGCCGACCCC GTAGTCAACC TCACCATCAC AGGATTATTT ATCGTCGGCG GCCTAGGGTT TTCGGTGTGG ATTGATCTTC GCCGCCATAA ACGTTGGTCA AAATTAACCG TCTACAGCCG CATGATGATC ACCGGCACCA TACTGATCAA CGCCGTAGCC CTGATTGCCA TTTACTTGAT TGAATACAAC AACCCCAACA CCCTCGCGCC CTTAAGCGAA CTCGGCAAAT GGCTGGCCTC TTGGTTTCAA GCCGTTACCC CGCGCACCGC AGGCTTTAAT ACCCTGCCCA TAGATAAACT CGAAGATGGC TCAGCCCTGT TAATACTGGT GCTCATGTTT ATCGGCGGAG GCTCCCTCAG TACCGCCAGC GGCATTAAAG TGGTGACCTT TATGGTGTTA ATTCTGGCCA CCTATAGTTA TTTACGTCGT GATGAAGCCG CTTATGCCTT TAAACGAGAA ATCCCGAAAG AGACAATCAG TAAGGCATTA GCACTCACCA TGATCTCTAT AGGCGTGACA TGGCTGGCGA TTTTCGCCCT CGTACTCACC GAAAAAGCAC CCATTTTGGA TATCGCCTTC GAGGCTGTAT CGGCATTCGG TACAGTGGGA CTCTCCCGTG GATTAACCAG CAATTTATCG GGTGCAGGCC AAGGGATTAT CATCTTTATG ATGTATATGG GGCGCCTAGG CCCACTGATG CTGGCCTACT TCCTTGCCAA CCCAAGGGTC AAGAAATTGC GCTATGCAGA AACTAAATTG GCGATTGGGT AA
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Protein sequence | MVQWHPSLPL EQTQKAGKKL FGAPPFILSA SFALLILVGT CLLKLPIATE TPISWLQSLF TVTSAVTVTG LVVVDTGTVF TPFGQVIVAL LIQCGGLGLM TFAIVTLIAL GGKIGFLQQT VAKEAFNQTD TSTLVSTAKA VLVFSLLVEA VGMLILSVHW SDELGWQTSL FHGFFYTISA FNNAGFALSA DSLMPYVADP VVNLTITGLF IVGGLGFSVW IDLRRHKRWS KLTVYSRMMI TGTILINAVA LIAIYLIEYN NPNTLAPLSE LGKWLASWFQ AVTPRTAGFN TLPIDKLEDG SALLILVLMF IGGGSLSTAS GIKVVTFMVL ILATYSYLRR DEAAYAFKRE IPKETISKAL ALTMISIGVT WLAIFALVLT EKAPILDIAF EAVSAFGTVG LSRGLTSNLS GAGQGIIIFM MYMGRLGPLM LAYFLANPRV KKLRYAETKL AIG
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