Gene SNSL254_pSN254_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0131 
Symbol 
ID4929397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp113877 
End bp114482 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content51% 
IMG OID642572430 
Productputative 5'-nucleotidase 
Protein accessionYP_001102005 
Protein GI134047192 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATT CAAATTTCGG CTTTCTAGCT CTGGCCTTGC GCCAACGCCT GATCAAACGC 
TGGTCACTGA TGCACTCTGT TCAACCGGAG TCTGTGTTGG AACACAGCGC TGTTGTTACC 
CTGCTTTCCT ACCTGGCTGG CAATATTGCC ATTCAGCAAG GGAAGTCGGT GGATCTGGCA 
GTCATGCTTG CTCATGCTTC GTTGCATGAT GCAGCCGAGG TTCTCTGTTC GGATGTTGTA 
ACACCGGTCA AGAAAGCAAA CGCTGTTTTG CAGCGTGAGT TTGAACGACT GGAAAAGGCC 
GCAGAGGACA AACTCATCCA GACTCTTCCC GAAGAACTCC AGGATGCAGT CGCCATAGCC 
TTCGCTCCCG GTGGCTATGA ACAATCACTG GTTAAGGCCT GTGATACCTA CTCCGCTTAC 
ATCAAGTGCA AACTTGAGGT GGCCGCAGGT AATGGCCTTG AGTTCCAGGA TGCTCTCAGC 
AAAATGGAAC GTGTTGTTGC TCAGGTGAAA TCGGACTTCC CGGAAATCGA CGCTCTGGAC 
AAATGGTTTG GTAACGGACT CGGCCATTCA GTAGATAAAC TGCTGGCAGG GGGTAACGAT 
GACTAA
 
Protein sequence
MSNSNFGFLA LALRQRLIKR WSLMHSVQPE SVLEHSAVVT LLSYLAGNIA IQQGKSVDLA 
VMLAHASLHD AAEVLCSDVV TPVKKANAVL QREFERLEKA AEDKLIQTLP EELQDAVAIA 
FAPGGYEQSL VKACDTYSAY IKCKLEVAAG NGLEFQDALS KMERVVAQVK SDFPEIDALD 
KWFGNGLGHS VDKLLAGGND D