Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_pSN254_0129 |
Symbol | |
ID | 4929405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_009140 |
Strand | + |
Start bp | 110947 |
End bp | 113400 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642572428 |
Product | hypothetical protein |
Protein accession | YP_001102003 |
Protein GI | 134047259 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAAA CATTAAACTT TGATCTATCA GAACAACCCA TCCCAGTGCT TTTGCGTGGG GATAAGTGGG ATTCTGTTTG GTCAGAACTG ACTGATAACG AGGATTTGAA CTTCGTTGAT GCCAGTAGAG GAACCAGTCT GTCATCGTTG ATCACGTCAT CGGTTGAGTC CATTCACACG GCCTTAATTG ATGGGTGGAC CATGATGATC GGCTATTCCA GTGGTAAAGA TTCTGAAACG GTCTTGCACC TGTTCCTGAT GGCCCTGATC CGGGCTGTAA GGAGTGGGGC GACCATCAGC CAGCACCACT TCATCTTGCA CACTGACACA CTGATCGAAA GCCCAGAGGT AAGGTGGCTG GCGGATCAGA AACTGGCCGA GCTGGAGCGT TTCATTGCGA AGGAAAACCT TCCTCTGACC ATCGTTCTAG CAAAGCCTGG GATCTCGCAG AGTTGGACGG GCCGAATCCT TACTGGGAGG GGGTTGCCTA CGTTTTCCAA CTCCACGGCC CGCCAGTGTA GCCAGGATTT AAAAATCACC TCTGCCAAAA GAGCGAAGGC AGCTTATATG CGAGAGCTTC CCAAAGAGGT TCGACAGAAA GTCTGCCTTT TGCTGGGCAG TCGTGATGCT GAAAGCACTA TTCGTGCGGC CAACATTGCA AAACAGCGAG GAAGCTCAGA TCGCGTCATT AAGACGAAAG ATGGGGGTGA GCTGTATGTG GTGAAAAACT GGTTGGCGAG TGATGTCTGG GAGTTCTTAC TATCCGCTGG CATGGGCTCA GCATATCCTC TGCCAAGTTA CTTGGAGAGC AATGTCACTA CGGCAGAGCT TTACAAGGCG GCAACAGGGG AGTGCGTGTG GTCGGCAACA GAGAAGAAGG CCAGTGACGC CTGTGGCGCT CGCTTCGGTT GCTGGGCTTG CCAGGCTGTT GGGTTGGATA AGTCAATGGA GACGTTGCTT GCCACGGACC CTGAAAGGCA TGGCTATATG TCGGGGCTGA ACCGCATCCA GCGCTACTTG GCAAAACGCC GGTACGCATG GGAAGACCGC CATCCCGTAG GTCGAACGAT TTACGAGGGC GGATACATCA AAATACAGCC GGACGTTTAC AGTCCTGTTT TCCTAGAACG ATTGCTTCAT GTCTGTTGCA GCATGGACTA CATGGAGCAA AAGAGAGCTG ATGAGCTGGC ATACAAGCTG GCTACTGGTC AAGCAGAGGA TAACGACTGG AACCGTCGAA TGGCAGAGCC ACAATTCCGG ATCATATCGG AAGAGGCTTT AGTCCATATC GACTTCATGT GGGCCTTCCA TCATTTCAAT GATAAGCCTT TCCATGCCCT GGAGATTTAC CACAGGGTTT GGTCGATGGG TGATCTGGAC TTGCTGGAAG ACGAGCCGCA GTGTGAAACC GTTCCTCAGT CACCAATTCC GAAGCCATTG TGGTTGAAGG TTGGTCGCTG GGGCGATGGT TCGCTTTCTG ATGGCTTGGC CGATCCGTTA GCGGAAATGG CTTACTTTGA CGGCGGGGAT GACCCGTTGG CAGCGCAAGT GATCAATACC GCAGACGGAA AGAGAAGGGT GGTTTGCTTC GCAGAAGATG ATGAAGTGAA AGTCGATCCC GACTCCGCTG CGTTCATCAT CTGGAACGAA TACCCGCGAC TAAGGGAGTC TGTACTAAAG GGACATTATA CGCCCGGTAG TGCAGCGCAG TTCTACCTTC GGTTCGGAGC AATCCAGCTT GCGAAAGGAA AAGGCGCTTT GTATCACCGT ATGATGCAAA GAGGTCAAAC CTACCACCAG ATGGGCCTTA CAGGGCTACA GACGATGGAA GGAATCCAAC AGCGCAAGGA TGTCAAAGTG CTTAGCGATG CTAAGTACAA AGATCTGGTG AAGCGAAAAA TCAAGGGAAG ACTGGCAACG GTACGCTGGT GGGTCAACTT GCACTTAACG TTCAAGTACC ATCTGCACCA CCGTACTCCG ACGGGGTTGT TCATCGAGAA GCAACTTGAC CAGGAAGCAA TGGAAGAACA GAAACGGCAT CAGGAGCGAT GGTTTAACTA CGTGACTGAC GCGATGCTTT GTTACTCCAG CGCATTCTGT ATGAGCGTCA TGGAAGGGCG AGAGGGGAGC GGAAACGCCA ACATTCGTCG TTACATGGCC GCGACCAGAA GGAAGGCTTA TACGGCCCTC TGCGAGCTCT TGGACAATAC TGACGCCCAG TGGATGAATG ATGTGGTCCA GAGTGCCGTA GGGCAGTATG AGGCGATACA GGCAGCCCTA ACCGAAGGTT CCGCGCTTGC TATCTATCTC GACTGGATCA ACCTACTGTC AAAACGCCAT CCAGCCTCTT TGGAGCGACA TGTCAGAACG ATGATCAAGG CGGTTCAACG CTTACATCGC CGCGACGACA CAGAGTTGCA AAGAGGACAG CAAGGCTTGT CCTTGGCCGC ATAA
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Protein sequence | MQQTLNFDLS EQPIPVLLRG DKWDSVWSEL TDNEDLNFVD ASRGTSLSSL ITSSVESIHT ALIDGWTMMI GYSSGKDSET VLHLFLMALI RAVRSGATIS QHHFILHTDT LIESPEVRWL ADQKLAELER FIAKENLPLT IVLAKPGISQ SWTGRILTGR GLPTFSNSTA RQCSQDLKIT SAKRAKAAYM RELPKEVRQK VCLLLGSRDA ESTIRAANIA KQRGSSDRVI KTKDGGELYV VKNWLASDVW EFLLSAGMGS AYPLPSYLES NVTTAELYKA ATGECVWSAT EKKASDACGA RFGCWACQAV GLDKSMETLL ATDPERHGYM SGLNRIQRYL AKRRYAWEDR HPVGRTIYEG GYIKIQPDVY SPVFLERLLH VCCSMDYMEQ KRADELAYKL ATGQAEDNDW NRRMAEPQFR IISEEALVHI DFMWAFHHFN DKPFHALEIY HRVWSMGDLD LLEDEPQCET VPQSPIPKPL WLKVGRWGDG SLSDGLADPL AEMAYFDGGD DPLAAQVINT ADGKRRVVCF AEDDEVKVDP DSAAFIIWNE YPRLRESVLK GHYTPGSAAQ FYLRFGAIQL AKGKGALYHR MMQRGQTYHQ MGLTGLQTME GIQQRKDVKV LSDAKYKDLV KRKIKGRLAT VRWWVNLHLT FKYHLHHRTP TGLFIEKQLD QEAMEEQKRH QERWFNYVTD AMLCYSSAFC MSVMEGREGS GNANIRRYMA ATRRKAYTAL CELLDNTDAQ WMNDVVQSAV GQYEAIQAAL TEGSALAIYL DWINLLSKRH PASLERHVRT MIKAVQRLHR RDDTELQRGQ QGLSLAA
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