Gene SNSL254_pSN254_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0129 
Symbol 
ID4929405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp110947 
End bp113400 
Gene Length2454 bp 
Protein Length817 aa 
Translation table11 
GC content52% 
IMG OID642572428 
Producthypothetical protein 
Protein accessionYP_001102003 
Protein GI134047259 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAA CATTAAACTT TGATCTATCA GAACAACCCA TCCCAGTGCT TTTGCGTGGG 
GATAAGTGGG ATTCTGTTTG GTCAGAACTG ACTGATAACG AGGATTTGAA CTTCGTTGAT
GCCAGTAGAG GAACCAGTCT GTCATCGTTG ATCACGTCAT CGGTTGAGTC CATTCACACG
GCCTTAATTG ATGGGTGGAC CATGATGATC GGCTATTCCA GTGGTAAAGA TTCTGAAACG
GTCTTGCACC TGTTCCTGAT GGCCCTGATC CGGGCTGTAA GGAGTGGGGC GACCATCAGC
CAGCACCACT TCATCTTGCA CACTGACACA CTGATCGAAA GCCCAGAGGT AAGGTGGCTG
GCGGATCAGA AACTGGCCGA GCTGGAGCGT TTCATTGCGA AGGAAAACCT TCCTCTGACC
ATCGTTCTAG CAAAGCCTGG GATCTCGCAG AGTTGGACGG GCCGAATCCT TACTGGGAGG
GGGTTGCCTA CGTTTTCCAA CTCCACGGCC CGCCAGTGTA GCCAGGATTT AAAAATCACC
TCTGCCAAAA GAGCGAAGGC AGCTTATATG CGAGAGCTTC CCAAAGAGGT TCGACAGAAA
GTCTGCCTTT TGCTGGGCAG TCGTGATGCT GAAAGCACTA TTCGTGCGGC CAACATTGCA
AAACAGCGAG GAAGCTCAGA TCGCGTCATT AAGACGAAAG ATGGGGGTGA GCTGTATGTG
GTGAAAAACT GGTTGGCGAG TGATGTCTGG GAGTTCTTAC TATCCGCTGG CATGGGCTCA
GCATATCCTC TGCCAAGTTA CTTGGAGAGC AATGTCACTA CGGCAGAGCT TTACAAGGCG
GCAACAGGGG AGTGCGTGTG GTCGGCAACA GAGAAGAAGG CCAGTGACGC CTGTGGCGCT
CGCTTCGGTT GCTGGGCTTG CCAGGCTGTT GGGTTGGATA AGTCAATGGA GACGTTGCTT
GCCACGGACC CTGAAAGGCA TGGCTATATG TCGGGGCTGA ACCGCATCCA GCGCTACTTG
GCAAAACGCC GGTACGCATG GGAAGACCGC CATCCCGTAG GTCGAACGAT TTACGAGGGC
GGATACATCA AAATACAGCC GGACGTTTAC AGTCCTGTTT TCCTAGAACG ATTGCTTCAT
GTCTGTTGCA GCATGGACTA CATGGAGCAA AAGAGAGCTG ATGAGCTGGC ATACAAGCTG
GCTACTGGTC AAGCAGAGGA TAACGACTGG AACCGTCGAA TGGCAGAGCC ACAATTCCGG
ATCATATCGG AAGAGGCTTT AGTCCATATC GACTTCATGT GGGCCTTCCA TCATTTCAAT
GATAAGCCTT TCCATGCCCT GGAGATTTAC CACAGGGTTT GGTCGATGGG TGATCTGGAC
TTGCTGGAAG ACGAGCCGCA GTGTGAAACC GTTCCTCAGT CACCAATTCC GAAGCCATTG
TGGTTGAAGG TTGGTCGCTG GGGCGATGGT TCGCTTTCTG ATGGCTTGGC CGATCCGTTA
GCGGAAATGG CTTACTTTGA CGGCGGGGAT GACCCGTTGG CAGCGCAAGT GATCAATACC
GCAGACGGAA AGAGAAGGGT GGTTTGCTTC GCAGAAGATG ATGAAGTGAA AGTCGATCCC
GACTCCGCTG CGTTCATCAT CTGGAACGAA TACCCGCGAC TAAGGGAGTC TGTACTAAAG
GGACATTATA CGCCCGGTAG TGCAGCGCAG TTCTACCTTC GGTTCGGAGC AATCCAGCTT
GCGAAAGGAA AAGGCGCTTT GTATCACCGT ATGATGCAAA GAGGTCAAAC CTACCACCAG
ATGGGCCTTA CAGGGCTACA GACGATGGAA GGAATCCAAC AGCGCAAGGA TGTCAAAGTG
CTTAGCGATG CTAAGTACAA AGATCTGGTG AAGCGAAAAA TCAAGGGAAG ACTGGCAACG
GTACGCTGGT GGGTCAACTT GCACTTAACG TTCAAGTACC ATCTGCACCA CCGTACTCCG
ACGGGGTTGT TCATCGAGAA GCAACTTGAC CAGGAAGCAA TGGAAGAACA GAAACGGCAT
CAGGAGCGAT GGTTTAACTA CGTGACTGAC GCGATGCTTT GTTACTCCAG CGCATTCTGT
ATGAGCGTCA TGGAAGGGCG AGAGGGGAGC GGAAACGCCA ACATTCGTCG TTACATGGCC
GCGACCAGAA GGAAGGCTTA TACGGCCCTC TGCGAGCTCT TGGACAATAC TGACGCCCAG
TGGATGAATG ATGTGGTCCA GAGTGCCGTA GGGCAGTATG AGGCGATACA GGCAGCCCTA
ACCGAAGGTT CCGCGCTTGC TATCTATCTC GACTGGATCA ACCTACTGTC AAAACGCCAT
CCAGCCTCTT TGGAGCGACA TGTCAGAACG ATGATCAAGG CGGTTCAACG CTTACATCGC
CGCGACGACA CAGAGTTGCA AAGAGGACAG CAAGGCTTGT CCTTGGCCGC ATAA
 
Protein sequence
MQQTLNFDLS EQPIPVLLRG DKWDSVWSEL TDNEDLNFVD ASRGTSLSSL ITSSVESIHT 
ALIDGWTMMI GYSSGKDSET VLHLFLMALI RAVRSGATIS QHHFILHTDT LIESPEVRWL
ADQKLAELER FIAKENLPLT IVLAKPGISQ SWTGRILTGR GLPTFSNSTA RQCSQDLKIT
SAKRAKAAYM RELPKEVRQK VCLLLGSRDA ESTIRAANIA KQRGSSDRVI KTKDGGELYV
VKNWLASDVW EFLLSAGMGS AYPLPSYLES NVTTAELYKA ATGECVWSAT EKKASDACGA
RFGCWACQAV GLDKSMETLL ATDPERHGYM SGLNRIQRYL AKRRYAWEDR HPVGRTIYEG
GYIKIQPDVY SPVFLERLLH VCCSMDYMEQ KRADELAYKL ATGQAEDNDW NRRMAEPQFR
IISEEALVHI DFMWAFHHFN DKPFHALEIY HRVWSMGDLD LLEDEPQCET VPQSPIPKPL
WLKVGRWGDG SLSDGLADPL AEMAYFDGGD DPLAAQVINT ADGKRRVVCF AEDDEVKVDP
DSAAFIIWNE YPRLRESVLK GHYTPGSAAQ FYLRFGAIQL AKGKGALYHR MMQRGQTYHQ
MGLTGLQTME GIQQRKDVKV LSDAKYKDLV KRKIKGRLAT VRWWVNLHLT FKYHLHHRTP
TGLFIEKQLD QEAMEEQKRH QERWFNYVTD AMLCYSSAFC MSVMEGREGS GNANIRRYMA
ATRRKAYTAL CELLDNTDAQ WMNDVVQSAV GQYEAIQAAL TEGSALAIYL DWINLLSKRH
PASLERHVRT MIKAVQRLHR RDDTELQRGQ QGLSLAA