Gene SNSL254_pSN254_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0106 
Symbol 
ID4929541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp93624 
End bp94592 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content54% 
IMG OID642572405 
ProductAAA family ATPase 
Protein accessionYP_001101980 
Protein GI134047151 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0687561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0739465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAT ACTCTCAATT CTCAGTAAGC AAGGTTTTCG GTATGCCCAG CATTCCGGAG 
AAGGTAACGG CCATCGGCTA CGCTGACGGT TCAAACCCTT TCATCCCTGC CACTGATACC 
AACTACGTTT TCCGCAAAGA GTTTCTGCGA GAGGTCTTGG CCTATCTCAA AGAGCCTGGC 
GGTGACGCAT TGTTCGTAAC CGGCCCTACC GGGTCTGGCA AAACCTCAGG TATCACCGAG 
ATCGCTGGTC GTCTCAACTG GCCTGTTCAG CAAATCACTG CCCACGGGCG GATGGAGCTG 
ACAGATCTGA TTGGACATCA CGCTCTGGTC GCGGAAAAGC CTGGTCAACC ACCTGTCATG 
AAGTTCATGT ATGGACCTCT GGCAGTCGCT ATGCGTGAAG GTCATCTGCT CCTCATCAAC 
GAGGTGGATT TGGCCGACCC TGCCGAGCTG GCTGGTCTCA ACGATGTCCT TGAAGGGCGT 
CCCCTTGTGA TCGCTCAGAA TGGCGGGGAA ATCATCAAGC CGCACCCGAT GTTTCGTGTG 
GTCGTTACTG GTAACTCTAC GGGGTCCGGT GATGCTTCTG GTTTGTACCA GGGGGTGATG 
ATGCAGAACC TCGCAGCTAT GGATCGCTAT CGTTTCACCA AAGTAGGGTA TGCGGATGAG 
GAAGCTGAAC TCAGCATTCT TGGCCGTGCT ACTCCGAAAC TTCCGGAAAA TGTGCGGAAG 
GGAATGGTTC GGATTGCTAA TCAGGTCCGC AAACTGTTTC TTGGCGAAAA CGGTGAAGAT 
GGTCAGATCA GCGTCACCAT GTCCACTCGG ACGTTGGTGC GTTGGGCGAA ACTGTCTCTA 
GCGTTCCGTG GTGCCCCAAA TGCTCTTGAA TACGCCTTGG ATCAAGCTCT GCTTATCCGT 
GCGGCCAAAG AGGAGCGTGA AGCCATCCTG CGTGTTGCGA AGGATGTGTT CGGGGACCAA 
TGGCGCTAA
 
Protein sequence
MSQYSQFSVS KVFGMPSIPE KVTAIGYADG SNPFIPATDT NYVFRKEFLR EVLAYLKEPG 
GDALFVTGPT GSGKTSGITE IAGRLNWPVQ QITAHGRMEL TDLIGHHALV AEKPGQPPVM 
KFMYGPLAVA MREGHLLLIN EVDLADPAEL AGLNDVLEGR PLVIAQNGGE IIKPHPMFRV 
VVTGNSTGSG DASGLYQGVM MQNLAAMDRY RFTKVGYADE EAELSILGRA TPKLPENVRK 
GMVRIANQVR KLFLGENGED GQISVTMSTR TLVRWAKLSL AFRGAPNALE YALDQALLIR 
AAKEEREAIL RVAKDVFGDQ WR