| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0097 |
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| Symbol | |
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| ID | 4929459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 84296 |
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| End bp | 84826 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642572396 |
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| Product | type IV conjugative transfer system signal peptidase |
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| Protein accession | YP_001101971 |
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| Protein GI | 134047165 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.120482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTC CACTCAAGAA GTATTTCGTC AAAAAGGAAT CCTGGAAGCG CTTCGGGGTT
AAGGCAGGTG TGACACTAGT GGTTCTTTGG GCTGCTGGTG CGGCCTTTGC CAGCCGCTAC
CGTATTGGCA TTGATCCACA ACAGGAGAAG TGCCTGCCGG GTTACACCTT CTTCCTCATT
GATCTGAACG ACCAAACTCT GGAGAGGGGA GCGGTTTACG CCTTCCAAGC CAAGAACATG
CAGCCTTTCT ACAAGGACGG GACTCGCATG GTCAAAATCC TCACCGGTAT GCCGGGGGAT
AAAGTCGAGA TCAACGATAA GTGGAAGATC ACCGTCAATG GTGATGTCGT CGGAGAGGGG
CTCCAGCTCG CAGGGAAACT ACATCTGCCA GAGAGCCACT TTTACGGCAA GACCACGCTG
AAAGAGAACA ACTACTGGTT TATGGGCAAA AGCCCATTCA GCTTCGACTC ACGTTACTGG
GGGACTGTGA AAAATGATCA GATCATTGGC CGCGCATATC CCCTGTTCTA A
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| Protein sequence | MNFPLKKYFV KKESWKRFGV KAGVTLVVLW AAGAAFASRY RIGIDPQQEK CLPGYTFFLI
DLNDQTLERG AVYAFQAKNM QPFYKDGTRM VKILTGMPGD KVEINDKWKI TVNGDVVGEG
LQLAGKLHLP ESHFYGKTTL KENNYWFMGK SPFSFDSRYW GTVKNDQIIG RAYPLF
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