Gene SNSL254_pSN254_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0094 
Symbol 
ID4929385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp80816 
End bp81523 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID642572393 
Producthypothetical protein 
Protein accessionYP_001101968 
Protein GI134047146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.892093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.129187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACAA AATTACTTGG GGCGCTGATG GTGTTCGGGA TTATTACCGG CACGGCTCAT 
GCGTCATCGA AATTGGAAAT CACCGATCCC AGAGCGGCGA AGATAGAGGA CATTGTAGAG 
CTACCCATCA AAGGGGTTCG AGCCGTCCAA AGTGATGGGC AGATCATGTT CCTCTCTGAA 
AACGGACGAT TTGTTATTTC AGGACAAATC TACGACCTGT GGAGCAAGAA GCCCCTCAAC 
ACGATGTCCC AAATGAGGGA TGTAGCGGAG CGTATCCACT TCAAGAGCAT GGGCATGGAT 
GTGGACACGC TGAACACTGT GTCGATGGGG CGTGGTGACA AAGAGGTGGT GGTCTTTGTT 
GATCCTAGGT GCGCGGTTTG CCATCAGCTC ATGGGTGATG CCAAATCGCT GGTGGATGAT 
TACACCTTTA AATTTATCGT GATTCCAGCT CTGGGTGCTG AGTCCAACCG CCTGGCAAAA 
AACTTGTACT GCGCGAAAGA CAAAACCCAC GCGCTTGATG CGCTGATGAA CAACACCCTG 
GGTTCCCTTC CTTCAAAAGA AACCTGCGAC CCCGGCCAAT ACGACCAAAC GCTGCTGACA 
GCTCATTTCA TTGGGATTGA GGGCGTTCCG TTCGTTGTTG CTCCGGATGG TCGTGTCAGC 
AAAGGACGTC CGAAGAACCT GAAATCATGG TTGGAGAGTG CTGAATGA
 
Protein sequence
MRTKLLGALM VFGIITGTAH ASSKLEITDP RAAKIEDIVE LPIKGVRAVQ SDGQIMFLSE 
NGRFVISGQI YDLWSKKPLN TMSQMRDVAE RIHFKSMGMD VDTLNTVSMG RGDKEVVVFV 
DPRCAVCHQL MGDAKSLVDD YTFKFIVIPA LGAESNRLAK NLYCAKDKTH ALDALMNNTL 
GSLPSKETCD PGQYDQTLLT AHFIGIEGVP FVVAPDGRVS KGRPKNLKSW LESAE