Gene SNSL254_A4946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4946 
Symbol 
ID6483779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4814442 
End bp4815131 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID642740156 
ProductDNA-binding response regulator CreB 
Protein accessionYP_002043830 
Protein GI194444693 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones101 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC CGCAGGTCTG GTTAGTCGAG GATGAACAGG GAATCGCCGA TACGCTCATC 
TACACCCTGC AACTGGAAGG GTTTACCGTT GAGCTATTCG CTCGCGGGCT GCCCGCGCTG
GAAAAAGCGC GTCAGCAACG GCCGGATGCG GTGATTCTCG ATGTGGGACT ACCGGATATC
AGCGGCTTTG AGCTGTGTCG GCAGTTGCTG GAACGCCATC CTGCGCTGCC GATTCTTTTC
CTGACTGCCC GTAGCGATGA AGTGGATCGA TTGCTTGGTC TGGAGATCGG CGCAGATGAT
TATGTCGCCA AGCCGTTCTC GCCGCGCGAA GTGAGCGCCC GCGTGCGCAC GCTGCTGCGC
CGGGTGAAAA AGTTTGCTGC GCCGTCGCCG GTGGTGCGTA CCGGACATTT TGAACTCAAT
GAACCGGCGG CGCAGATCGC CTGGTTTGGT ACGCCGCTCT CGCTGACGCG TTATGAGTTT
CTGCTCCTTA AAACCCTGCT GCTGTCGCCG GAACGCGTGT ACTCGCGTCA GCAATTGATG
GATATTGTCT GGTCTGATGC CCAGGAGACC TTCGATCGGA CGGTCGATAC ACACATCAAA
ACCCTGCGCG CTAAACTACG CGCGATCAAT CCGGAGCTCT CGCCAATTAA CACGCATCGT
GGAATGGGAT ACAGCCTGAG GAGCGTCTGA
 
Protein sequence
MQQPQVWLVE DEQGIADTLI YTLQLEGFTV ELFARGLPAL EKARQQRPDA VILDVGLPDI 
SGFELCRQLL ERHPALPILF LTARSDEVDR LLGLEIGADD YVAKPFSPRE VSARVRTLLR
RVKKFAAPSP VVRTGHFELN EPAAQIAWFG TPLSLTRYEF LLLKTLLLSP ERVYSRQQLM
DIVWSDAQET FDRTVDTHIK TLRAKLRAIN PELSPINTHR GMGYSLRSV