| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4609 |
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| Symbol | |
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| ID | 6486793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4493549 |
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| End bp | 4495150 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642739833 |
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| Product | cyclic diguanylate phosphodiesterase (EAL) domain protein |
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| Protein accession | YP_002043515 |
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| Protein GI | 194445416 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.18383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.98216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAA GCACACGACG CAAGGTGTTG AGATTTCTCG GAACGATCAT TGTGGTGTTA
CTTCCTGTAT TGCTGGCGAT CTGGTTTGCT CATATCCGGG CAGTCTCTGA AACCAGAAAT
CAGTTACATT CATTTGCGCA GTTGGTATTA GATAAAACGG AGCGGGTTAT CCTGCAAGCA
GATTTAGCCC GCGATGCTGC TGAACAATAT CAGGGGCAAG CCTGTACGCC AGCCCATCAA
CAGCGAATGC TGAATATTAT CCGCGGTCGT TTGTACATTA ATGAGTTGAT TTATGCTAAG
GGCCAGCGTT TTCTATGCTC TACGGTTATG ACGCCAATAA GTCCTTATTT TATTCCCCGC
GCTGACTATA AACGAAAGCC TGACATCGCT ATTTATTACT ATCGTGATAC GCCTTTTTTC
AACGGTTATA AAATGACATA TATGCAGCGG GGAAACTATG TCGCGGTTAT CAATCCCTTA
TCTTATAGCG AGGTGATGTC AGACGATCCG GCGTTGGCCT GGGGAATGTA TGATACGGTG
ACCAACACCT TTTTCTCCCT GAGTGAACAG GCGCAGGCTG ATCAGCTATT ACCTTTGGTA
CGACGGAGTG AACCTGTGTT CCAACAGGGT GAGCGTTTTT ATACTCTGGT AAAATCAGCA
AAACGACCGG TTGCCGCGAT TGTGTCAACC TCAAAGCAAC GCTTTTACCA GAACCTCTTT
CATCAGCTTA CGTTAACGCT ACCGTTAGGG ATCATCTGTA GCATTATCGT CTTATTTATG
TGGTCACGAT CCCGGCAGGC ATATTACTCA CCGCGTCGAT TGCTGCAACG GGCCATTACC
AGGCACCAGC TTTGCCTTCA TTATCAGCCG ATCATTGATA TCCGAAACGG GACATGTGTA
GGTGCCGAAG CGCTATTGCG TTGGCCGGGC TATCACGGTC CGGTGATGAG CCCGTGCGAA
TTTATTCCGC TGGCGGAAAA AGAGGGGATG ATTGAGCAGA TCACCGATTA TGTCGTCGAA
GAGGTATTTA ATGATTTAGG TGGTTTTCTG GCCGCGCACC CGCATCTTTA TGTCTCTATC
AATCTCGCTG CCGCCGATTT TCTCTCTTCC CGACTAATTG TGATGATTCA TGAAAAAACG
CGTCAGCATT CAGTGCTTGC GCAACAGATA AAGGTTGAAG TGACTGAGCG CGGATTTATT
GATGTGCCTA AAATGACGCC GATTATTCAG GCGTTTCGCC AGGCGGGATA CGAGGTGGCA
ATTGATGACT TTGGTACCGG CTATTCGAAC TTGCATAACC TGTACTCATT AAATATCGAC
CTTTTAAAAA TTGATAAATC TTTTGTCGAC ACGCTAACCA CTAATAGCGC CAGCCATTTG
ATTGTGGAAC ATATTATTGA AATGGCGCAA AGTTTGCGGC TAAAAATCAT TGCTGAGGGG
GTTGAAACGG CTGAACAGGT TAGCTGGTTG CTAAAACGCG GCGTTCAGTA TTGTCAGGGA
TGGCACTTTG CGAAGGCGTT ACCACCGCAG GAATTCATCG CCTGGCTACA ACAAACGCCC
GCGCCTCTGA CGATACGCGG GCAGAGGCCC TACAGGCGGT GA
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| Protein sequence | MSQSTRRKVL RFLGTIIVVL LPVLLAIWFA HIRAVSETRN QLHSFAQLVL DKTERVILQA
DLARDAAEQY QGQACTPAHQ QRMLNIIRGR LYINELIYAK GQRFLCSTVM TPISPYFIPR
ADYKRKPDIA IYYYRDTPFF NGYKMTYMQR GNYVAVINPL SYSEVMSDDP ALAWGMYDTV
TNTFFSLSEQ AQADQLLPLV RRSEPVFQQG ERFYTLVKSA KRPVAAIVST SKQRFYQNLF
HQLTLTLPLG IICSIIVLFM WSRSRQAYYS PRRLLQRAIT RHQLCLHYQP IIDIRNGTCV
GAEALLRWPG YHGPVMSPCE FIPLAEKEGM IEQITDYVVE EVFNDLGGFL AAHPHLYVSI
NLAAADFLSS RLIVMIHEKT RQHSVLAQQI KVEVTERGFI DVPKMTPIIQ AFRQAGYEVA
IDDFGTGYSN LHNLYSLNID LLKIDKSFVD TLTTNSASHL IVEHIIEMAQ SLRLKIIAEG
VETAEQVSWL LKRGVQYCQG WHFAKALPPQ EFIAWLQQTP APLTIRGQRP YRR
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