Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3872 |
Symbol | |
ID | 6484250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3747020 |
End bp | 3747865 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642739137 |
Product | PfkB domain protein |
Protein accession | YP_002042848 |
Protein GI | 194444154 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA GCGTATTGGG TATTGGCGAC AACGTTGTCG ATAAATACCT GCATTCCGGC ATCATGTACC CCGGCGGTAA TGCATTAAAT TTTGCTGTCT ATGCGAAATT AGCAGGCATC CCCAGCGCGT TTATGGGGGC GTTTGGCAAT GACGACGCCG CGCAGCACGT ACAGAATGTA TTACACCAGC TACAGATAGA CATCTCTCAC AGCCGCCATT ATACCGGCGA AAATGGGTAT GCCTGTATCC GTCTCTCGCA TGGCGATCGG CAATTTGTCG CCAGCAACAA AAACGGCGTA TTGCGGGAAC ATCCTTTTAG CCTGTCTGAC GACGATCTTC GCTATATATC ACAATTTACC TTAGTCCATT CCAGTATTAA CGGCCACCTG GAATCGGAAC TGGAGAAAAT TAAACAACAA ACCGTCTTAC TCTCTTTTGA TTTTTCCGGG CGCGGTACAA ACGACTATTT TGAAAAGGTA TGCCCGTGGG TAGATTATGG ATTTGTCTCC TGTAGCGGGT TATCGCCAGA TGAAATCAAA ATAAAACTCA ATAAACTTTA TCGTTATGGC TGTCGGCATA TTATTGCCAC CTGCGGGCAT GAAAAAGTTT ATTATTTTTC CGGCGCGGAT TATCTGGAGT GGCAACCTGT TTATATCGAA CCTGTCGATA CGCTGGGCGC AGGCGACGCC TTCTTAACCG GTTTTTTGCT TTCCATTTTG CAATCGGGTA TGGCGGAACC CGATAAAGAA AGCGTGTTAC GCGCCATGCG GCAGGGCGGG AAATCGGCGG CGCAGGTGTT ATCTCATTAC GGCGCATTTG GTTTTGGTAA ACCGTTTGCA CAATAG
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Protein sequence | MSISVLGIGD NVVDKYLHSG IMYPGGNALN FAVYAKLAGI PSAFMGAFGN DDAAQHVQNV LHQLQIDISH SRHYTGENGY ACIRLSHGDR QFVASNKNGV LREHPFSLSD DDLRYISQFT LVHSSINGHL ESELEKIKQQ TVLLSFDFSG RGTNDYFEKV CPWVDYGFVS CSGLSPDEIK IKLNKLYRYG CRHIIATCGH EKVYYFSGAD YLEWQPVYIE PVDTLGAGDA FLTGFLLSIL QSGMAEPDKE SVLRAMRQGG KSAAQVLSHY GAFGFGKPFA Q
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