Gene SNSL254_A3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3872 
Symbol 
ID6484250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3747020 
End bp3747865 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content48% 
IMG OID642739137 
ProductPfkB domain protein 
Protein accessionYP_002042848 
Protein GI194444154 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA GCGTATTGGG TATTGGCGAC AACGTTGTCG ATAAATACCT GCATTCCGGC 
ATCATGTACC CCGGCGGTAA TGCATTAAAT TTTGCTGTCT ATGCGAAATT AGCAGGCATC
CCCAGCGCGT TTATGGGGGC GTTTGGCAAT GACGACGCCG CGCAGCACGT ACAGAATGTA
TTACACCAGC TACAGATAGA CATCTCTCAC AGCCGCCATT ATACCGGCGA AAATGGGTAT
GCCTGTATCC GTCTCTCGCA TGGCGATCGG CAATTTGTCG CCAGCAACAA AAACGGCGTA
TTGCGGGAAC ATCCTTTTAG CCTGTCTGAC GACGATCTTC GCTATATATC ACAATTTACC
TTAGTCCATT CCAGTATTAA CGGCCACCTG GAATCGGAAC TGGAGAAAAT TAAACAACAA
ACCGTCTTAC TCTCTTTTGA TTTTTCCGGG CGCGGTACAA ACGACTATTT TGAAAAGGTA
TGCCCGTGGG TAGATTATGG ATTTGTCTCC TGTAGCGGGT TATCGCCAGA TGAAATCAAA
ATAAAACTCA ATAAACTTTA TCGTTATGGC TGTCGGCATA TTATTGCCAC CTGCGGGCAT
GAAAAAGTTT ATTATTTTTC CGGCGCGGAT TATCTGGAGT GGCAACCTGT TTATATCGAA
CCTGTCGATA CGCTGGGCGC AGGCGACGCC TTCTTAACCG GTTTTTTGCT TTCCATTTTG
CAATCGGGTA TGGCGGAACC CGATAAAGAA AGCGTGTTAC GCGCCATGCG GCAGGGCGGG
AAATCGGCGG CGCAGGTGTT ATCTCATTAC GGCGCATTTG GTTTTGGTAA ACCGTTTGCA
CAATAG
 
Protein sequence
MSISVLGIGD NVVDKYLHSG IMYPGGNALN FAVYAKLAGI PSAFMGAFGN DDAAQHVQNV 
LHQLQIDISH SRHYTGENGY ACIRLSHGDR QFVASNKNGV LREHPFSLSD DDLRYISQFT
LVHSSINGHL ESELEKIKQQ TVLLSFDFSG RGTNDYFEKV CPWVDYGFVS CSGLSPDEIK
IKLNKLYRYG CRHIIATCGH EKVYYFSGAD YLEWQPVYIE PVDTLGAGDA FLTGFLLSIL
QSGMAEPDKE SVLRAMRQGG KSAAQVLSHY GAFGFGKPFA Q