Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3816 |
Symbol | |
ID | 6486125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3690882 |
End bp | 3692096 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642739081 |
Product | ribokinase |
Protein accession | YP_002042792 |
Protein GI | 194445840 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 109 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTTG AACGCCATCA TAGAATATTG AAGGAACTCA GTATTTCGGG AGTTGTAAAA GTTTCAAATC TGGCGAAAAG TCTCAAGGTA ACAAAGGAAA CTATTCGTTC AGATCTCAAT GAACTTGCCG GACAGGGATA TCTTACTCGC TGTCATGGTG GTGCATTTAT TACCCTTGAT TCTCTTGATA ACGTCGCAAA AAATGAAATT GCTTATGTGC TGGAAAAATA TGAATCAGCG CAGAAAATAA AAAAAGGTCT CTCTGCCATG AAAAATAATG TATGTGTTAT TGGCTCGTTC AATGTTGATA TTATCAGTTA TCTACCGAGA TTACCCTCAA CGGGAGAATC ATTGCTGGCC GATAAATTTA TTTTTTCACC CGGCGGTAAG GGATGTAATC AGGCATTAGC AGCAAGCTAT GCCGATTCTG ATGTGCATTT TATTACTAAA GTAGGCTCAG ATCATTTTAG TGATTACGCC ATTAATTTTA TAAACTCATC AAAAATCCAT AAAAGTGTTA TCTACCAGAC CAAAGAAACA CAAACAGGTA CAGCAACCAT CATGGTGAAT GGAGATACCG GAGATAACGT CATCGCTATT TACCCTGGCG CCAACATGAC AATTTCCCCT GATGAAATCA CCATTCAGAA AGAAGCCATT GTTCATTCAG ATATTGTTCT TGTCCAACTG GAGACGAATT ACGAAGCGCT GCAGCAAACA ATTCGTCTCG CACAAAAAAA TGACATACCG GTCATCATCA ATCCAGCGCC GTACAATGAC ATGGTTAACA CCATCATTGA TAACATTGAC TATATTACGC CAAATGAAAC GGAAGCAGGC CTGCTGGCCA ATATGGCGGT TAATGATATC GAATCAGCCA AATGCGCGGC CAAAATTATT CATCAGAAAG GCGTCAAAAA TACCATTATT ACATTAGGTA GCAAAGGTTC GCTTGCTTAT GACGGCACAC AATTCATCTA TTCCCCGGCA TTTCCGGCAG TTGTAAAAAA TACGGCGGGA GCGGGTGACG CTTTCAATGG CGCCCTCGCA TCTGGCCTTG CAAAAGGAAA GTCACTGGCA TCCGCATTGT GCTACGCCAG CGCATTTGCC TCACTTGCGG TTGAAACGCC TAATGCCTCT GATATGCCGG AAAACGACTC CGTTCTTCAT CGTATTCAGG GTTCACATTA CAAACAAACT ATCTCTACTC ACTAA
|
Protein sequence | MKFERHHRIL KELSISGVVK VSNLAKSLKV TKETIRSDLN ELAGQGYLTR CHGGAFITLD SLDNVAKNEI AYVLEKYESA QKIKKGLSAM KNNVCVIGSF NVDIISYLPR LPSTGESLLA DKFIFSPGGK GCNQALAASY ADSDVHFITK VGSDHFSDYA INFINSSKIH KSVIYQTKET QTGTATIMVN GDTGDNVIAI YPGANMTISP DEITIQKEAI VHSDIVLVQL ETNYEALQQT IRLAQKNDIP VIINPAPYND MVNTIIDNID YITPNETEAG LLANMAVNDI ESAKCAAKII HQKGVKNTII TLGSKGSLAY DGTQFIYSPA FPAVVKNTAG AGDAFNGALA SGLAKGKSLA SALCYASAFA SLAVETPNAS DMPENDSVLH RIQGSHYKQT ISTH
|
| |