Gene SNSL254_A3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3653 
Symbol 
ID6486266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3542069 
End bp3542731 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content43% 
IMG OID642738928 
ProductDNA-binding transcriptional regulator EnvR 
Protein accessionYP_002042645 
Protein GI194445141 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.451581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA AAACGAAGGC GGATGCGCTT AAAACGCGGC AACATTTGAT TGAAACCGCT 
ATTGCGCAGT TCGCTTTGCG CGGCGTTGCC AACACGACGT TGAATGATAT CGCTGATGCC
GCTGATGTCA CGCGGGGCGC CATCTACTGG CACTTTGAGA ATAAAACGCA GTTGTTTAAT
GAGGTTTGGT TACAGCAACC ACCTTTACGC GAACTTATTC AGGATAGGCT TACGGGATGC
TGGAATGATA ATCCTTTACA GGATCTACGA GAGAAATTTA TTGCAGCCTT ACAATATATT
GCGGCAGTGC CTCGTCAGCA GGCATTAATG CAGATTTTAT ATCATAAATG TGAATTCCAT
AATGGTATGA TATCGGAACA GGCCATTCGG GAGAAGATTG GTTTCCATCA TCAGTCGCTG
CTTGAAGTAT TACAGCGATG TATGGATAAA AAGCTGATCT CAGGCAGTCT TGATCTGGAT
GTCATATTAA TTATTCTGCA TGGTAGTTTT AGCGGAATAG TAAAGAACTG GTTAATGAAT
CCCACAAGTT ATGATCTCTA TAAGCAGGCG CCTGCATTAG TCGATAATGT ATTAAAAATG
CTAAACCCGG ATGGCAGTGT GAGGCAATTA ATGCCAAATG AACAACAGGC GGAAGAAGCC
TGA
 
Protein sequence
MAKKTKADAL KTRQHLIETA IAQFALRGVA NTTLNDIADA ADVTRGAIYW HFENKTQLFN 
EVWLQQPPLR ELIQDRLTGC WNDNPLQDLR EKFIAALQYI AAVPRQQALM QILYHKCEFH
NGMISEQAIR EKIGFHHQSL LEVLQRCMDK KLISGSLDLD VILIILHGSF SGIVKNWLMN
PTSYDLYKQA PALVDNVLKM LNPDGSVRQL MPNEQQAEEA