Gene SNSL254_A3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3343 
Symbol 
ID6482167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3247434 
End bp3247997 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content52% 
IMG OID642738634 
Producthypothetical protein 
Protein accessionYP_002042355 
Protein GI194442229 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.171118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.329323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAC AGCATCACTT TCTTATTGCC ATGCCTGCGC TCCAGGACCC GATTTTCCGC 
CGTTCCGTAG TGTATATTTG CGAGCACAAC CAGGACGGCG CTATGGGGAT TATTATTAAT 
AAGCCTTTGG AAAATCTGCA AATTGAAGGG ATTCTGGAAA AACTAAAAAT TACGCCGGAA 
CCGCGCGATT CGGCAATTCG TCTTGATAAA GCCGTGATGC TCGGCGGCCC GCTGGCGGAA 
GATCGCGGAT TTATTCTCCA TACTCCGCCG TCACGTTTCG CCTCCAGCAT TCGTATCTCA 
GACAATACCG TGATTACCAC CTCCCGCGAT GTGCTGGAAA CGTTAGGTAC CCAACAACAG 
CCTTCCGATG TGCTGGTCGC GCTGGGCTAC GCCTCCTGGG ATAAAGGCCA GCTTGAACAA 
GAGCTGCTTG ATAACGCCTG GCTTACCGCG CCCGCCGATC TCAATATTTT GTTCAAAACG 
CCCATTGCCG AGCGCTGGCG CGAAGCGGCA AAACTTATTG GCATTGATAT TCTGACCATG 
CCTGGCGTTG CGGGGCACGC CTGA
 
Protein sequence
MNLQHHFLIA MPALQDPIFR RSVVYICEHN QDGAMGIIIN KPLENLQIEG ILEKLKITPE 
PRDSAIRLDK AVMLGGPLAE DRGFILHTPP SRFASSIRIS DNTVITTSRD VLETLGTQQQ 
PSDVLVALGY ASWDKGQLEQ ELLDNAWLTA PADLNILFKT PIAERWREAA KLIGIDILTM 
PGVAGHA