Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3117 |
Symbol | |
ID | 6484711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3032844 |
End bp | 3033755 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738429 |
Product | LysR family transcriptional regulator |
Protein accession | YP_002042153 |
Protein GI | 194443789 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.396466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.0204094 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAATT TGCAGCGTAT GTCGCTGTTT ATCGCCGTGG TAGATAGCGG CAGCTTCACG GCCGCCGCCG CCGCATCGGG TCAAACAAAA GCGGTAGTGA GTTTTAATAT TCGGCAGCTT GAAAAAGAGC TTGGCGTAAC GTTACTGCTA CGTTCCACCC GACGACTGAC GCTCACAGAC GCCGGCGTCC TCTTTTACCA AAAAGGCGTG AATTTACTCA ATGCCGCGAA AAATTTGCAG GATGAAGTGC GTGCCAGCCA TAGTGGGCTG GGCGGCGAGT TACGTATTAC CACTACGCCC GAGTTTGGCG AACAGGTGGT CATTCCGGTA CTGGCGCAGT TTAGTCAGCG CCATCCCGAT CTCCGTATTC GGCATATGTC CTCATCACAT CATGCCGATT TAATTGCCGA GCGCTTTGAT GTGGCGATTC GGCTTGGCTC GCTGGCCGAC TCCCGCTATC GCGCCGCGCT GATATCCCGC TTTACCATTC TGCCGGTCGC CGCGCCGCAG TGGCTCGCCC GCCACCCCGT GTCGTCGCTG GAGTCGTTGG CTCAGGCGGA ATGGATTATT CATGAGCGAT TACCTACGCC GCTACGGTGG TCAGTAACGA ATAATCATGG CCAACACTCA CGCCTGGAGA TAAGCAAAGC CGGCAAAATT TCTGTCGACA GCGCGCGCTC GCTGATGGCC TTCGCTCTCG CGGGAAGCGG CGTCGCATTA CTGCCGCAAT GGTTAGTCAA CACCGCACTG GAGGAGGGAA CGTTAATTCA CGTGTTACCC GACTATCATT TTCCCCGTCA GGGCATTTAT GCCGTTTACC CGGACGCCCG CCATGTATCG ACAAAAGTAC GCGCATTTAT TGATTTTTTA CGTTCGCAAT GGGATTGCGG GGAGCACGCC CCATCATCGT AG
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Protein sequence | MLNLQRMSLF IAVVDSGSFT AAAAASGQTK AVVSFNIRQL EKELGVTLLL RSTRRLTLTD AGVLFYQKGV NLLNAAKNLQ DEVRASHSGL GGELRITTTP EFGEQVVIPV LAQFSQRHPD LRIRHMSSSH HADLIAERFD VAIRLGSLAD SRYRAALISR FTILPVAAPQ WLARHPVSSL ESLAQAEWII HERLPTPLRW SVTNNHGQHS RLEISKAGKI SVDSARSLMA FALAGSGVAL LPQWLVNTAL EEGTLIHVLP DYHFPRQGIY AVYPDARHVS TKVRAFIDFL RSQWDCGEHA PSS
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